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PH2017_36_ELK_O_B_scaffold_2_prodigal-single.1__X__X__00311
Bact-VirPH2017_36_ELK_O_B_scaffold_2_prodigal-single.1__X__X__00311
Identity
- Kingdom:
- phage
Quality
93.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-46
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3tiiA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.73 | 57.0 | 4.88e-01 | 91.9% | 60.0% |
| 1gmuA01 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.68 | 52.0 | 4.50e-01 | 94.6% | 88.1% |
| 3fysA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.67 | 53.0 | 3.62e-01 | 94.6% | 26.1% |
| 3ramA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 53.0 | 3.86e-01 | 94.6% | 92.4% |
| 2kl8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.66 | 53.0 | 4.14e-01 | 91.9% | 90.6% |
| 4jrfA03 | 1.10.20.150 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › | 0.66 | 49.0 | 3.81e-01 | 94.6% | 100.0% |
| 4gi3C00 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.64 | 50.0 | 4.47e-01 | 91.9% | 66.7% |
| 2nydA02 | 2.20.28.300 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.64 | 51.0 | 5.07e-01 | 94.6% | 92.7% |
| 3tj8A02 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.63 | 46.0 | 3.99e-01 | 94.6% | 85.1% |
| 1pzxA02 | 2.20.28.50 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › DegV, N-terminal domain, peripheral subdomain | 0.62 | 45.0 | 4.58e-01 | 83.8% | 100.0% |
| 5ujeA01 | 3.30.1760.10 | Alpha Beta › 2-Layer Sandwich › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, domain 2 › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, domain 2 | 0.62 | 49.0 | 3.62e-01 | 94.6% | 99.1% |
| 4x9xA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 49.0 | 3.43e-01 | 97.3% | 48.3% |
| 2jfdA03 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.61 | 45.0 | 4.02e-01 | 89.2% | 90.9% |
| 1zud400 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.59 | 45.0 | 3.96e-01 | 97.3% | 53.0% |
| 4h7lB00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 46.0 | 3.36e-01 | 91.9% | 29.1% |
| 5c17A00 | 3.30.450.410 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.58 | 45.0 | 2.93e-01 | 100.0% | 33.0% |
| 1xa3A02 | 3.30.1540.10 | Alpha Beta › 2-Layer Sandwich › formyl-coa transferase, domain 3 › formyl-coa transferase, domain 3 | 0.58 | 42.0 | 3.15e-01 | 81.1% | 80.6% |
| 2gh9A02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.57 | 40.0 | 2.74e-01 | 89.2% | 72.4% |
| 1totA00 | 3.30.60.90 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Zinc finger, ZZ-type | 0.57 | 44.0 | 4.10e-01 | 94.6% | 84.6% |
| 4qglA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 42.0 | 2.85e-01 | 100.0% | 90.8% |
| 3n6xA03 | 3.30.1490.270 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.51 | 35.0 | 3.32e-01 | 86.5% | 69.6% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3221968 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.82 | 63.0 | 5.85e-01 | 89.2% | 68.0% |
| 3930374 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.75 | 62.0 | 4.73e-01 | 97.3% | 40.0% |
| 3800199 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.75 | 64.0 | 4.88e-01 | 100.0% | 48.9% |
| 3493153 | 2485.1.1.49 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_12 | 0.69 | 54.0 | 3.44e-01 | 100.0% | 41.8% |
| 4472004 | 304.22.1.1 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C | 0.69 | 52.0 | 4.28e-01 | 89.2% | 78.7% |
| 4153537 | 304.22.1.1 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C | 0.68 | 54.0 | 4.36e-01 | 94.6% | 76.2% |
| 3511364 | 2485.1.1.49 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_12 | 0.68 | 55.0 | 3.62e-01 | 100.0% | 45.9% |
| 5025224 | 304.1.1.0 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain | 0.67 | 51.0 | 3.64e-01 | 91.9% | 100.0% |
| 3885685 | 904.1.1.11 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-UBP | 0.66 | 51.0 | 4.98e-01 | 94.6% | 100.0% |
| 432311 | 304.22.1.1 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C | 0.64 | 48.0 | 4.03e-01 | 94.6% | 78.8% |
| 4457666 | 304.22.1.1 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C | 0.63 | 47.0 | 3.94e-01 | 94.6% | 78.8% |
| 3603835 | 304.122.1.1 ↗ | a+b two layers › Alpha-beta plaits › Nitrogen repressor-like proteins › Nitrogen repressor-like proteins › NRD1_2 | 0.61 | 45.0 | 3.52e-01 | 94.6% | 67.6% |
| 4050326 | 304.22.1.1 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C | 0.61 | 45.0 | 3.80e-01 | 94.6% | 85.0% |
| 4174001 | 304.22.1.1 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C | 0.60 | 46.0 | 4.07e-01 | 97.3% | 95.4% |
| 4414345 | 230.4.1.1 ↗ | a+b two layers › T-fold › ApbE-like › ApbE-like › ApbE | 0.59 | 47.0 | 3.58e-01 | 91.9% | 50.5% |
| 3975174 | 3253.1.1.0 ↗ | a+b two layers › ferredoxin-like domain in flagellar biosynthesis protein flhA › ferredoxin-like domain in flagellar biosynthesis protein flhA › ferredoxin-like domain in flagellar biosynthesis protein flhA | 0.59 | 45.0 | 4.29e-01 | 97.3% | 100.0% |
| 3429986 | 10.32.1.37 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin | 0.57 | 43.0 | 2.93e-01 | 91.9% | 53.3% |
| 3992718 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 46.0 | 3.65e-01 | 94.6% | 47.1% |
| 4180568 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 42.0 | 3.49e-01 | 81.1% | 74.3% |
| 3422860 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.56 | 44.0 | 2.95e-01 | 94.6% | 30.3% |
| 2389482 | 10.32.1.38 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like | 0.56 | 42.0 | 2.86e-01 | 91.9% | 55.6% |
| 3324952 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 43.0 | 2.98e-01 | 97.3% | 32.5% |
| 3620810 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 43.0 | 3.56e-01 | 94.6% | 49.3% |
| 3717819 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 41.0 | 3.30e-01 | 91.9% | 44.4% |
D2
high
residues 53-262_304-338
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2d13A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.78 | 37.0 | 5.47e-01 | 77.1% | 98.2% |
| 2e18A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.75 | 56.0 | 5.54e-01 | 98.0% | 73.0% |
| 1xngA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.72 | 55.0 | 5.49e-01 | 96.7% | 76.1% |
| 2dplA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.69 | 47.0 | 5.55e-01 | 92.7% | 100.0% |
| 3qtgA03 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.69 | 32.0 | 4.56e-01 | 80.8% | 91.3% |
| 4xfjB01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.68 | 48.0 | 5.61e-01 | 85.3% | 100.0% |
| 1ni5A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.68 | 52.0 | 5.38e-01 | 93.1% | 83.3% |
| 3dnfA03 | 3.40.1010.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain | 0.67 | 30.0 | 4.46e-01 | 82.4% | 99.0% |
| 1zunA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.67 | 51.0 | 5.74e-01 | 93.5% | 100.0% |
| 1ct9B02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.66 | 62.0 | 5.77e-01 | 100.0% | 83.3% |
| 4bucA03 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.66 | 31.0 | 4.20e-01 | 76.3% | 84.4% |
| 4bwvA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.64 | 50.0 | 5.26e-01 | 97.1% | 87.2% |
| 6i3mE02 | 3.40.50.10470 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 | 0.64 | 44.0 | 4.80e-01 | 96.7% | 83.5% |
| 2j3hA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.63 | 36.0 | 4.12e-01 | 93.9% | 74.0% |
| 3vrhA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.63 | 52.0 | 4.84e-01 | 95.1% | 70.1% |
| 3eyaH01 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.63 | 32.0 | 3.71e-01 | 93.5% | 65.2% |
| 1m1zA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.62 | 58.0 | 5.56e-01 | 100.0% | 87.0% |
| 5hvmA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.61 | 39.0 | 4.19e-01 | 80.4% | 73.1% |
| 4q6bA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 32.0 | 4.29e-01 | 82.4% | 92.5% |
| 1q15D02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.61 | 56.0 | 5.44e-01 | 96.7% | 89.2% |
| 4bjhB02 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.60 | 33.0 | 4.27e-01 | 92.7% | 91.7% |
| 2h6eA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 35.0 | 4.52e-01 | 82.4% | 99.3% |
| 2o2eB02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 32.0 | 3.98e-01 | 96.3% | 81.7% |
| 4pioA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 40.0 | 4.62e-01 | 86.1% | 91.7% |
| 1m0sA01 | 3.40.50.1360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 32.0 | 4.02e-01 | 93.1% | 84.9% |
| 2x9qB00 | 3.40.50.11710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase | 0.58 | 47.0 | 4.99e-01 | 84.9% | 95.0% |
| 3d3uA01 | 3.40.1080.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaconate Coenzyme A-transferase › Glutaconate Coenzyme A-transferase | 0.58 | 39.0 | 4.62e-01 | 93.1% | 98.8% |
| 3oqvA00 | 3.40.50.11710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase | 0.58 | 44.0 | 4.69e-01 | 77.1% | 97.6% |
| 1ybhA02 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.56 | 33.0 | 3.72e-01 | 89.0% | 72.0% |
| 2r47A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 33.0 | 4.16e-01 | 83.3% | 100.0% |
| 3tm4A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 34.0 | 3.91e-01 | 84.5% | 85.1% |
| 6jtdA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 34.0 | 3.80e-01 | 81.2% | 77.0% |
| 1ovmA02 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.53 | 32.0 | 3.84e-01 | 89.4% | 89.1% |
| 3x2fB01 | 3.40.50.1480 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Adenosylhomocysteinase-like | 0.53 | 36.0 | 3.80e-01 | 86.9% | 73.6% |
| 1c4oA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 32.0 | 3.88e-01 | 86.1% | 93.5% |
| 2bm8B02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 33.0 | 3.89e-01 | 82.4% | 94.1% |
ECOD (72)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4948508 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.73 | 48.0 | 5.83e-01 | 88.2% | 100.0% |
| 4936084 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.72 | 52.0 | 5.96e-01 | 93.5% | 98.9% |
| 4960192 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.72 | 52.0 | 5.94e-01 | 96.3% | 98.9% |
| None | — | 0.72 | 54.0 | 5.55e-01 | 95.9% | 80.0% | |
| 4973517 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.71 | 50.0 | 5.83e-01 | 95.9% | 100.0% |
| 3928948 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.71 | 67.0 | 6.04e-01 | 100.0% | 93.8% |
| 4928374 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.71 | 45.0 | 5.51e-01 | 88.6% | 99.4% |
| 3971366 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.70 | 65.0 | 5.60e-01 | 97.1% | 95.6% |
| 5024566 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.70 | 52.0 | 5.92e-01 | 92.7% | 100.0% |
| None | — | 0.70 | 52.0 | 5.89e-01 | 92.7% | 100.0% | |
| 3628813 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.70 | 66.0 | 5.97e-01 | 100.0% | 92.3% |
| None | — | 0.70 | 55.0 | 6.07e-01 | 98.4% | 100.0% | |
| None | — | 0.70 | 54.0 | 5.95e-01 | 95.5% | 99.5% | |
| None | — | 0.69 | 55.0 | 6.00e-01 | 97.6% | 100.0% | |
| 4903237 | 2005.1.1.47 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase, tRNA_Me_trans | 0.69 | 46.0 | 5.55e-01 | 91.4% | 100.0% |
| None | — | 0.69 | 55.0 | 5.99e-01 | 98.4% | 100.0% | |
| None | — | 0.69 | 54.0 | 5.93e-01 | 98.4% | 99.5% | |
| 4589597 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.69 | 65.0 | 5.70e-01 | 100.0% | 80.8% |
| 1140086 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.68 | 33.0 | 4.45e-01 | 82.9% | 85.9% |
| 3287133 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.68 | 65.0 | 5.34e-01 | 100.0% | 93.3% |
| 3503191 | 2005.1.1.47 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase, tRNA_Me_trans | 0.68 | 56.0 | 6.00e-01 | 99.2% | 99.5% |
| 4366103 | 2005.1.1.8 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Arginosuc_synth | 0.68 | 54.0 | 5.87e-01 | 98.4% | 100.0% |
| 5053470 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.68 | 64.0 | 5.85e-01 | 100.0% | 81.0% |
| 5055577 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.68 | 64.0 | 5.59e-01 | 100.0% | 83.9% |
| 5037878 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.68 | 56.0 | 5.58e-01 | 98.0% | 83.6% |
| 5020381 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.68 | 64.0 | 5.70e-01 | 100.0% | 97.6% |
| 5074632 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.68 | 64.0 | 5.98e-01 | 100.0% | 87.8% |
| 3298888 | 2005.1.1.23 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA_Me_trans | 0.67 | 55.0 | 5.90e-01 | 97.6% | 100.0% |
| 3958329 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.67 | 56.0 | 5.71e-01 | 99.6% | 90.6% |
| 4930540 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.67 | 53.0 | 5.68e-01 | 97.6% | 94.0% |
| 5029050 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.66 | 63.0 | 6.13e-01 | 100.0% | 96.2% |
| 3233267 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.66 | 63.0 | 5.68e-01 | 100.0% | 80.9% |
| 4955158 | 7592.1.1.1 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Cas_NE0113 | 0.66 | 41.0 | 4.67e-01 | 84.1% | 80.0% |
| 4196387 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.66 | 52.0 | 5.34e-01 | 94.3% | 85.2% |
| 4977476 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.66 | 62.0 | 5.99e-01 | 100.0% | 93.5% |
| 5062204 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.66 | 53.0 | 5.68e-01 | 96.3% | 95.3% |
| 5069140 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 40.0 | 4.61e-01 | 84.9% | 81.1% |
| 4949619 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.65 | 62.0 | 5.33e-01 | 100.0% | 80.0% |
| 5051749 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.65 | 53.0 | 5.46e-01 | 97.6% | 89.4% |
| 1122392 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.64 | 50.0 | 5.26e-01 | 97.1% | 87.2% |
| None | — | 0.64 | 51.0 | 5.54e-01 | 90.2% | 100.0% | |
| 3602090 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.64 | 55.0 | 5.77e-01 | 100.0% | 99.1% |
| 1548176 | 7570.1.1.1 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › Mur_ligase_C | 0.63 | 29.0 | 3.85e-01 | 77.6% | 76.3% |
| 5015866 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.63 | 55.0 | 5.74e-01 | 100.0% | 99.6% |
| 4964532 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.63 | 38.0 | 4.79e-01 | 75.5% | 100.0% |
| None | — | 0.62 | 39.0 | 3.84e-01 | 83.3% | 56.6% | |
| 4102020 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.62 | 39.0 | 3.83e-01 | 83.3% | 56.6% |
| 3467130 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.61 | 32.0 | 3.68e-01 | 80.0% | 67.0% |
| 4589313 | 2003.1.1.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Shikimate_DH | 0.61 | 37.0 | 4.26e-01 | 86.1% | 80.0% |
| 4666487 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.60 | 55.0 | 5.36e-01 | 95.9% | 94.8% |
| 3651679 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.60 | 52.0 | 5.48e-01 | 91.8% | 100.0% |
| 4462073 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.60 | 55.0 | 5.09e-01 | 95.9% | 93.4% |
| 4049858 | 327.3.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › GMP synthetase C-terminal dimerisation domain › GMP synthetase C-terminal dimerisation domain | 0.60 | 55.0 | 5.30e-01 | 98.8% | 99.6% |
| 2505948 | 2003.1.7.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › IF-2B | 0.60 | 42.0 | 4.57e-01 | 96.7% | 83.8% |
| 3982277 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.60 | 49.0 | 5.35e-01 | 89.4% | 100.0% |
| 4623374 | 7570.1.1.0 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain | 0.60 | 37.0 | 4.30e-01 | 76.7% | 85.1% |
| 3353868 | 2003.1.5.111 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Rsm22 | 0.59 | 33.0 | 4.15e-01 | 79.2% | 90.7% |
| 4970030 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.59 | 32.0 | 4.14e-01 | 86.1% | 89.7% |
| 3370636 | 2003.1.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N | 0.59 | 33.0 | 4.09e-01 | 87.3% | 85.8% |
| 5083839 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.59 | 51.0 | 5.16e-01 | 89.8% | 92.5% |
| 5049723 | 7518.1.1.0 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like | 0.59 | 42.0 | 4.69e-01 | 82.4% | 93.7% |
| 4941014 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 37.0 | 4.14e-01 | 83.7% | 78.8% |
| 4958691 | 7518.1.1.1 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C | 0.58 | 42.0 | 4.65e-01 | 92.2% | 91.3% |
| 4380041 | 2003.4.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP | 0.57 | 39.0 | 4.42e-01 | 96.3% | 91.7% |
| 3955014 | 2003.1.5.41 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › RMNT_CmcI | 0.56 | 38.0 | 3.93e-01 | 89.0% | 70.6% |
| 4150091 | 2003.1.1.25 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Shikimate_DH,SDH_C | 0.56 | 36.0 | 4.04e-01 | 85.3% | 82.1% |
| 4929190 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.54 | 46.0 | 4.77e-01 | 90.2% | 94.8% |
| 3464847 | 7561.1.1.1 ↗ | a/b three-layered sandwiches › Isochorismatase-like hydrolases › Isochorismatase-like hydrolases › Isochorismatase-like hydrolases › Isochorismatase | 0.54 | 43.0 | 4.36e-01 | 92.2% | 83.7% |
| 3434986 | 7512.1.1.1 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT | 0.54 | 34.0 | 3.33e-01 | 80.8% | 56.0% |
| 4292772 | 2003.1.4.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › TPP_enzyme_M | 0.54 | 32.0 | 3.66e-01 | 89.4% | 78.9% |
| 4956945 | 2004.1.1.176 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Beta-Casp | 0.53 | 36.0 | 4.28e-01 | 84.9% | 100.0% |
| 4412872 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.52 | 39.0 | 3.92e-01 | 92.7% | 75.2% |
D3
medium
residues 263-303_386-402
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rauA00 | 1.25.40.280 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › alix/aip1 like domains | 0.63 | 45.0 | 2.79e-01 | 77.6% | 56.4% |