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PH2017_36_ELK_O_B_scaffold_2_prodigal-single.1__X__X__00425
Bact-VirPH2017_36_ELK_O_B_scaffold_2_prodigal-single.1__X__X__00425
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-74_86-102_188-223
Domain cluster:
rep: putative_oxogluterate_iron-dependent_dioxygenase__YP_009052114__Aureococcus_anophagefferens_virus__1474867__D2-172
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2a1xA00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.82 | 77.0 | 6.03e-01 | 100.0% | 84.6% |
| 3nnfA00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.82 | 75.0 | 5.47e-01 | 97.6% | 75.2% |
| 4xcbD00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.81 | 75.0 | 5.87e-01 | 99.2% | 86.1% |
| 4qkbA00 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.79 | 72.0 | 6.22e-01 | 96.9% | 92.6% |
| 5yblD01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.78 | 72.0 | 5.67e-01 | 98.4% | 75.6% |
| 2fctB00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.76 | 70.0 | 5.21e-01 | 99.2% | 79.9% |
| 1dcsA00 | 2.60.120.330 | Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain | 0.74 | 68.0 | 5.21e-01 | 99.2% | 76.7% |
| 1h2kA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.73 | 68.0 | 5.10e-01 | 99.2% | 84.4% |
| 4cswA01 | 2.60.120.650 | Mainly Beta › Sandwich › Jelly Rolls › Cupin | 0.69 | 63.0 | 5.29e-01 | 99.2% | 92.9% |
| 3qh6A00 | 3.10.129.150 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Domain of unknown function (DUF5070) | 0.68 | 62.0 | 6.04e-01 | 98.4% | 90.0% |
| 8begA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 40.0 | 3.71e-01 | 70.1% | 82.5% |
| 3d0sA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 30.0 | 3.66e-01 | 85.8% | 80.0% |
| 2p17A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 49.0 | 3.92e-01 | 96.9% | 98.0% |
| 2c9aA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 41.0 | 3.82e-01 | 78.0% | 82.7% |
| 2e56A00 | 2.60.40.770 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 42.0 | 4.01e-01 | 79.5% | 86.8% |
| 2f68X02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 41.0 | 3.79e-01 | 78.7% | 72.8% |
| 3v10A02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 39.0 | 3.74e-01 | 76.4% | 74.0% |
| 4jdzA02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 39.0 | 3.57e-01 | 76.4% | 80.6% |
| 2ehbD00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.52 | 31.0 | 3.17e-01 | 77.2% | 57.9% |
| 1r17A02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 38.0 | 3.61e-01 | 77.2% | 77.8% |
| 4l8jA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.52 | 29.0 | 3.23e-01 | 98.4% | 69.5% |
| 4es8B01 | 2.60.120.1240 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 39.0 | 3.34e-01 | 78.0% | 77.0% |
| 2vxaA00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.52 | 27.0 | 3.40e-01 | 100.0% | 90.9% |
| 5axgA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.52 | 38.0 | 3.84e-01 | 76.4% | 87.3% |
| 3irpX02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 38.0 | 3.65e-01 | 77.2% | 75.7% |
| 3hr6A02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 37.0 | 3.47e-01 | 74.8% | 75.8% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3180126 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.80 | 74.0 | 5.75e-01 | 98.4% | 88.1% |
| 3188672 | 10.12.1.53 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 | 0.79 | 73.0 | 5.67e-01 | 98.4% | 91.3% |
| 3598513 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.75 | 68.0 | 5.59e-01 | 98.4% | 77.8% |
| 3296680 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.74 | 67.0 | 6.24e-01 | 96.9% | 91.0% |
| 3612604 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.73 | 66.0 | 5.33e-01 | 98.4% | 76.2% |
| 3165210 | 10.12.1.40 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › JmjC_2 | 0.69 | 64.0 | 4.83e-01 | 100.0% | 67.9% |
| 1833868 | 10.12.1.57 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › DUF5070 | 0.69 | 62.0 | 6.04e-01 | 97.6% | 90.1% |
| 3631345 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.66 | 59.0 | 5.96e-01 | 95.3% | 99.2% |
| 4268211 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.59 | 41.0 | 3.66e-01 | 70.1% | 99.4% |
| 3226646 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.56 | 28.0 | 3.42e-01 | 77.2% | 73.8% |
| 3898732 | 11.1.1.560 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKAT_KLD | 0.56 | 28.0 | 3.24e-01 | 97.6% | 63.3% |
| 3509038 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.55 | 31.0 | 3.50e-01 | 77.2% | 70.0% |
| 3231572 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 35.0 | 3.95e-01 | 74.0% | 82.0% |
| 3368463 | 331.4.1.2 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF | 0.54 | 32.0 | 3.18e-01 | 77.2% | 55.4% |
| None | — | 0.54 | 32.0 | 3.30e-01 | 78.0% | 60.8% | |
| 3904852 | 12.5.1.2 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › GPS | 0.53 | 40.0 | 3.58e-01 | 79.5% | 96.2% |
| 3886715 | 12.3.1.43 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › NCU-G1 | 0.53 | 41.0 | 3.10e-01 | 82.7% | 58.5% |
| 1713377 | 12.1.1.21 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_66 | 0.52 | 38.0 | 3.84e-01 | 76.4% | 86.6% |
| 3461676 | 10.32.1.212 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GUB_WAK_bind | 0.51 | 39.0 | 3.39e-01 | 80.3% | 82.0% |
| 3093592 | 12.1.1.21 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_66 | 0.51 | 38.0 | 3.89e-01 | 77.2% | 98.4% |
| 4301797 | 212.1.1.8 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribonuclease_P | 0.50 | 36.0 | 3.64e-01 | 96.1% | 71.5% |
| 3193663 | 11.1.1.646 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRP_N | 0.50 | 36.0 | 3.50e-01 | 74.8% | 93.1% |
D2
medium
residues 75-85_103-187
Domain cluster:
representative