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PHAGE-A10--js4906-27-5_S32_scaffold_40_curated_closed_complete_prodigal-single.1__X__X__00106
Bact-VirPHAGE-A10--js4906-27-5_S32_scaffold_40_curated_closed_complete_prodigal-single.1__X__X__00106
Identity
- Kingdom:
- phage
Quality
89.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-108
Domain cluster:
rep: OP753453.1__WAB24442.1__X__00067__D80-189
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ae0X01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.83 | 78.0 | 5.91e-01 | 100.0% | 61.7% |
| 4jcwA01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.75 | 69.0 | 6.37e-01 | 100.0% | 98.1% |
| 3d30A01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.74 | 69.0 | 6.27e-01 | 100.0% | 94.4% |
| 3sumB00 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.74 | 67.0 | 5.63e-01 | 97.6% | 88.2% |
| 3m3gA00 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.73 | 65.0 | 5.68e-01 | 95.2% | 94.2% |
| 1cr5A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.71 | 60.0 | 6.26e-01 | 98.8% | 100.0% |
| 1qcsA01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.70 | 63.0 | 6.45e-01 | 100.0% | 100.0% |
| 2napA04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.67 | 59.0 | 5.29e-01 | 96.4% | 100.0% |
| 4ga6A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.65 | 58.0 | 5.91e-01 | 97.6% | 98.8% |
| 1zc1A01 | 2.40.40.50 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › Ubiquitin fusion degradation protein UFD1, N-terminal domain | 0.65 | 58.0 | 5.44e-01 | 100.0% | 94.2% |
| 1q16A13 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.64 | 58.0 | 4.75e-01 | 100.0% | 78.7% |
| 1wlfA01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.64 | 57.0 | 5.73e-01 | 100.0% | 97.6% |
| 2ki8A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.63 | 57.0 | 4.99e-01 | 100.0% | 87.2% |
| 1ynjD04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.61 | 55.0 | 4.56e-01 | 100.0% | 86.9% |
| 3fjsC00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 34.0 | 3.16e-01 | 100.0% | 43.0% |
| 5owvD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 48.0 | 3.57e-01 | 90.5% | 95.5% |
| 8e9gG01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.58 | 49.0 | 4.72e-01 | 96.4% | 100.0% |
| 5ldaB00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.54 | 31.0 | 3.57e-01 | 100.0% | 82.5% |
| 5f29B00 | 3.30.70.1450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain | 0.54 | 34.0 | 3.61e-01 | 100.0% | 74.6% |
| 1peqA02 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.54 | 44.0 | 2.80e-01 | 92.9% | 92.9% |
| 2hyxA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 36.0 | 3.19e-01 | 100.0% | 45.8% |
| 2cu3B00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.53 | 34.0 | 3.81e-01 | 98.8% | 88.9% |
| 2d9rA00 | 2.40.30.100 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › AF2212/PG0164-like | 0.52 | 46.0 | 4.61e-01 | 100.0% | 100.0% |
| 1x2jA00 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.51 | 39.0 | 2.75e-01 | 84.5% | 78.6% |
| 1yg9A03 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.50 | 39.0 | 3.50e-01 | 83.3% | 87.2% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5083293 | 1.1.2.13 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › 3D | 0.93 | 89.0 | 8.12e-01 | 100.0% | 88.6% |
| 4623574 | 1.1.2.13 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › 3D | 0.90 | 83.0 | 7.80e-01 | 98.8% | 93.0% |
| 1567466 | 1.1.2.13 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › 3D | 0.88 | 77.0 | 6.22e-01 | 91.7% | 65.1% |
| 4927749 | 1.1.2.13 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › 3D | 0.86 | 75.0 | 7.20e-01 | 92.9% | 100.0% |
| 3274054 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.77 | 71.0 | 6.21e-01 | 100.0% | 85.8% |
| 4011221 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.71 | 65.0 | 5.07e-01 | 98.8% | 57.5% |
| 3180055 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.70 | 63.0 | 4.89e-01 | 96.4% | 55.6% |
| 3744692 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.69 | 58.0 | 5.94e-01 | 100.0% | 96.2% |
| 4963913 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.68 | 59.0 | 6.04e-01 | 97.6% | 97.5% |
| 5049516 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.68 | 61.0 | 5.19e-01 | 97.6% | 83.1% |
| 4048983 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.67 | 61.0 | 5.64e-01 | 100.0% | 96.2% |
| 4593420 | 12.1.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amylase_C | 0.67 | 38.0 | 3.60e-01 | 100.0% | 47.0% |
| 4008692 | 12.1.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amylase_C | 0.67 | 38.0 | 3.54e-01 | 100.0% | 44.8% |
| 3784921 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.67 | 58.0 | 5.87e-01 | 100.0% | 95.3% |
| 3386113 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.67 | 60.0 | 5.57e-01 | 98.8% | 94.3% |
| 3927447 | 1.1.2.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 | 0.66 | 59.0 | 5.44e-01 | 100.0% | 90.9% |
| 1883479 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.66 | 60.0 | 5.90e-01 | 100.0% | 95.6% |
| 5069203 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.66 | 61.0 | 5.95e-01 | 100.0% | 95.6% |
| 3597196 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.64 | 58.0 | 5.58e-01 | 100.0% | 96.8% |
| 4027672 | 1.1.2.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 | 0.63 | 57.0 | 5.32e-01 | 100.0% | 89.5% |
| 4024752 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.63 | 57.0 | 5.36e-01 | 98.8% | 84.0% |
| 4023557 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.63 | 56.0 | 4.67e-01 | 100.0% | 84.1% |
| 3427279 | 1.1.2.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 | 0.59 | 53.0 | 4.17e-01 | 100.0% | 57.2% |
| 3602200 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 40.0 | 4.32e-01 | 97.6% | 100.0% |
| 5079180 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.53 | 45.0 | 4.48e-01 | 100.0% | 91.1% |
| 3251791 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.52 | 39.0 | 3.71e-01 | 95.2% | 64.8% |
| 4938318 | 221.1.1.14 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS | 0.50 | 33.0 | 3.65e-01 | 100.0% | 89.2% |