←Back to structures
PHAGE-A10--js4906-27-5_S32_scaffold_40_curated_closed_complete_prodigal-single.1__X__X__00155
Bact-VirPHAGE-A10--js4906-27-5_S32_scaffold_40_curated_closed_complete_prodigal-single.1__X__X__00155
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-137
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ykhA00 | 6.10.140.200 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 34.0 | 3.86e-01 | 81.5% | 65.3% |
| 6cgaC02 | 1.20.58.860 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 33.0 | 4.05e-01 | 79.8% | 82.1% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.59 | 34.0 | 4.07e-01 | 83.9% | 85.4% |
| 5wp3B00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.58 | 40.0 | 4.44e-01 | 99.2% | 87.3% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 37.0 | 4.22e-01 | 92.7% | 91.3% |
| 1l4dB00 | 3.10.20.180 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.55 | 27.0 | 2.88e-01 | 98.4% | 50.9% |
| 2vxxA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.55 | 34.0 | 3.07e-01 | 100.0% | 45.3% |
| 1hs7A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 35.0 | 3.94e-01 | 97.6% | 84.5% |
| 1io1A01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.54 | 44.0 | 3.96e-01 | 100.0% | 63.9% |
| 3ll9B00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.54 | 48.0 | 3.84e-01 | 98.4% | 81.1% |
| 1o5hA00 | 1.20.120.680 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle | 0.53 | 38.0 | 3.28e-01 | 94.4% | 46.5% |
| 2hujA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.52 | 40.0 | 4.02e-01 | 79.8% | 93.6% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3584182 | 604.9.1.18 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Zip | 0.66 | 41.0 | 4.91e-01 | 99.2% | 92.9% |
| 3620304 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 36.0 | 4.35e-01 | 99.2% | 88.7% |
| 56798 | 150.7.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PE › PE | 0.60 | 33.0 | 4.13e-01 | 83.9% | 88.2% |
| 3880178 | 192.8.1.92 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › CUPID | 0.60 | 36.0 | 4.34e-01 | 96.8% | 92.5% |
| 3524429 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.58 | 38.0 | 4.21e-01 | 95.2% | 82.0% |
| 3276877 | 621.1.1.0 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0.58 | 38.0 | 4.31e-01 | 99.2% | 90.0% |
| 3864110 | 7558.1.1.1 ↗ | a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Acyltransferase | 0.58 | 48.0 | 3.52e-01 | 89.5% | 62.4% |
| 3769842 | 7558.1.1.1 ↗ | a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Acyltransferase | 0.58 | 48.0 | 3.74e-01 | 89.5% | 78.3% |
| 5069548 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.57 | 28.0 | 3.72e-01 | 77.4% | 87.7% |
| 3902495 | 603.1.1.23 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Sec20 | 0.56 | 40.0 | 3.34e-01 | 75.0% | 76.4% |
| 3397028 | 603.1.1.23 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Sec20 | 0.55 | 39.0 | 3.41e-01 | 73.4% | 94.4% |
| 3770274 | 603.1.1.198 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DUF4716 | 0.54 | 37.0 | 4.13e-01 | 94.4% | 89.5% |
| 3463944 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.53 | 43.0 | 4.37e-01 | 98.4% | 86.7% |
| 4187493 | 603.1.1.103 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF29732 | 0.53 | 38.0 | 3.68e-01 | 97.6% | 64.1% |
| 3516461 | 603.1.1.103 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF29732 | 0.53 | 38.0 | 4.06e-01 | 97.6% | 84.5% |
| 5023529 | 4958.1.1.4 ↗ | a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_5 | 0.53 | 45.0 | 3.56e-01 | 90.3% | 67.9% |
| 3491163 | 864.1.1.2 ↗ | a+b two layers › DLC › DLC › DLC › Tctex-1 | 0.50 | 41.0 | 4.15e-01 | 97.6% | 88.3% |
D2
medium
residues 138-234
D3
medium
residues 235-359