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PHAGE-A11--js4906-26-5_S28_scaffold_6_curated_closed_complete_prodigal-single.1__X__X__00002

Bact-Vir

PHAGE-A11--js4906-26-5_S28_scaffold_6_curated_closed_complete_prodigal-single.1__X__X__00002

Identity

Kingdom:
phage

Quality

87.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 16-101
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fewX02 3.30.1310.40 Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › 0.64 35.0 3.44e-01 91.9% 48.4%
3pvtA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.62 41.0 2.78e-01 84.9% 19.4%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3728775 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.68 38.0 3.91e-01 77.9% 56.5%
3362601 148.1.3.176 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF1677 0.67 39.0 4.46e-01 80.2% 76.9%
2443833 149.1.1.1 ↗ alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.62 33.0 2.77e-01 88.4% 28.3%
3397204 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.61 36.0 3.47e-01 77.9% 51.0%
3776020 386.1.1.19 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_2 0.60 37.0 2.49e-01 79.1% 18.6%
3833867 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.54 40.0 3.92e-01 80.2% 70.5%
2992489 386.1.1.26 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_6 0.53 26.0 2.90e-01 74.4% 54.4%