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PHAGE-A11--js4906-26-5_S28_scaffold_6_curated_closed_complete_prodigal-single.1__X__X__00134

Bact-Vir

PHAGE-A11--js4906-26-5_S28_scaffold_6_curated_closed_complete_prodigal-single.1__X__X__00134

Identity

Kingdom:
phage

Quality

74.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 21-66_304-366
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF26809.1 best Phage_T4_gp13 52.6 7.00e-14 58.7% 24.3%
PF26809.1 Phage_T4_gp13 29.3 9.10e-07 43.1% 17.7%
D2 medium residues 121-206
PDB
D3 medium residues 209-280
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1llaA03 1.10.1280.10 Mainly Alpha › Orthogonal Bundle › di-copper center containing domain from catechol oxidase › Di-copper center containing domain from catechol oxidase 0.60 46.0 3.19e-01 83.3% 26.0%
1e52A00 4.10.860.10 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain 0.56 37.0 4.12e-01 72.2% 89.3%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4023063 216.1.1.8 a+b two layers › UBC-like › UBC-like › UBC-like › Knl1_RWD_C 0.51 38.0 3.45e-01 79.2% 58.9%