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PHAGE-A11--js4906-26-5_S28_scaffold_6_curated_closed_complete_prodigal-single.1__X__X__00144
Bact-VirPHAGE-A11--js4906-26-5_S28_scaffold_6_curated_closed_complete_prodigal-single.1__X__X__00144
Identity
- Kingdom:
- phage
Quality
89.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-114
Domain cluster:
rep: CG_2015-01t_scaffold_2_prodigal-single.1__X__X__00010__D18-126
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 41.0 | 4.74e-01 | 100.0% | 81.9% |
| 1z47A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 27.0 | 4.16e-01 | 86.0% | 87.8% |
| 6bogA02 | 2.30.30.930 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 34.0 | 4.52e-01 | 93.9% | 91.7% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 32.0 | 4.22e-01 | 91.2% | 83.1% |
| 1uirA01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.66 | 30.0 | 4.24e-01 | 80.7% | 94.2% |
| 1y96A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 40.0 | 4.52e-01 | 100.0% | 81.4% |
| 4khbD02 | 2.30.29.220 | Mainly Beta › Roll › PH-domain like › Structure-specific recognition protein (SSRP1) | 0.64 | 38.0 | 4.43e-01 | 78.9% | 84.0% |
| 3ml4A02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 42.0 | 4.42e-01 | 95.6% | 76.0% |
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 37.0 | 4.37e-01 | 100.0% | 85.7% |
| 2f5kA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 29.0 | 4.22e-01 | 87.7% | 100.0% |
| 1mixA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 39.0 | 4.28e-01 | 93.0% | 77.4% |
| 3c6kA02 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.62 | 29.0 | 3.92e-01 | 82.5% | 89.3% |
| 3ic8A01 | 3.40.30.110 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › | 0.61 | 35.0 | 3.08e-01 | 100.0% | 35.6% |
| 3pggA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 39.0 | 4.61e-01 | 98.2% | 93.6% |
| 2it1A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 27.0 | 3.67e-01 | 86.0% | 78.7% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 31.0 | 4.10e-01 | 95.6% | 93.2% |
| 1b9mA03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.60 | 31.0 | 3.90e-01 | 86.0% | 81.7% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 30.0 | 4.09e-01 | 97.4% | 98.2% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.59 | 29.0 | 3.68e-01 | 81.6% | 79.1% |
| 4c92C00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 39.0 | 4.55e-01 | 98.2% | 96.2% |
| 1b69A00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.59 | 33.0 | 3.98e-01 | 100.0% | 88.4% |
| 3a46A01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.58 | 50.0 | 4.70e-01 | 92.1% | 84.6% |
| 4mb7A01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.58 | 49.0 | 4.72e-01 | 92.1% | 81.7% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 28.0 | 3.47e-01 | 94.7% | 78.1% |
| 2ckkA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 30.0 | 3.81e-01 | 93.9% | 98.2% |
| 3cvzB01 | 3.30.1490.290 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Low molecular weight S-layer protein, domain 1 | 0.55 | 35.0 | 3.72e-01 | 100.0% | 72.7% |
| 1ex4B02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.55 | 27.0 | 3.42e-01 | 93.0% | 83.1% |
| 1ci3M02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.55 | 28.0 | 3.79e-01 | 84.2% | 96.6% |
| 2qggA02 | 2.30.30.240 | Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain | 0.55 | 37.0 | 4.23e-01 | 97.4% | 96.4% |
| 2ymsC00 | 2.40.10.480 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.54 | 31.0 | 3.79e-01 | 91.2% | 86.7% |
| 5zr6A02 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.54 | 34.0 | 4.03e-01 | 96.5% | 96.1% |
| 1t3qC02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.53 | 27.0 | 2.74e-01 | 100.0% | 44.1% |
| 1tg0A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 31.0 | 3.77e-01 | 97.4% | 98.5% |
ECOD (68)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4505316 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 40.0 | 5.25e-01 | 93.9% | 95.0% |
| 5042986 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 37.0 | 5.00e-01 | 93.9% | 93.3% |
| 4071917 | 4.1.1.111 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_RapA | 0.73 | 34.0 | 4.92e-01 | 93.9% | 100.0% |
| 4120629 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.70 | 39.0 | 4.78e-01 | 97.4% | 84.0% |
| 3687350 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 33.0 | 4.48e-01 | 87.7% | 90.9% |
| 4221708 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.70 | 40.0 | 4.95e-01 | 98.2% | 91.4% |
| 4241924 | 4.1.1.93 ↗ | beta barrels › SH3 › SH3 › SH3 › 40S_S4_C | 0.70 | 33.0 | 3.69e-01 | 90.4% | 56.7% |
| 4284709 | 4.1.1.111 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_RapA | 0.70 | 33.0 | 4.75e-01 | 93.0% | 96.4% |
| 5053906 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.70 | 35.0 | 4.73e-01 | 93.9% | 93.3% |
| 3947700 | 4.8.1.25 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DSRB | 0.69 | 38.0 | 4.92e-01 | 93.9% | 96.8% |
| 4422252 | 4.1.1.455 ↗ | beta barrels › SH3 › SH3 › SH3 › DSRB | 0.69 | 37.0 | 4.94e-01 | 93.0% | 100.0% |
| 4426276 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 41.0 | 4.94e-01 | 97.4% | 97.1% |
| 3704305 | 4.1.1.344 ↗ | beta barrels › SH3 › SH3 › SH3 › PF31193 | 0.67 | 39.0 | 4.88e-01 | 100.0% | 94.3% |
| 3936053 | 4.1.1.71 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin7 | 0.66 | 40.0 | 4.86e-01 | 100.0% | 97.1% |
| 3507639 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.66 | 37.0 | 4.60e-01 | 97.4% | 90.0% |
| 4010681 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.66 | 39.0 | 4.26e-01 | 100.0% | 70.5% |
| 4293453 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 37.0 | 4.32e-01 | 97.4% | 78.8% |
| 5044389 | 4.26.1.0 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 | 0.65 | 30.0 | 4.43e-01 | 78.1% | 100.0% |
| 5026824 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 33.0 | 4.12e-01 | 94.7% | 78.6% |
| 4026408 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.65 | 37.0 | 3.89e-01 | 100.0% | 61.0% |
| 157624 | 4.1.1.47 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin6 | 0.65 | 40.0 | 4.52e-01 | 100.0% | 81.4% |
| 2727964 | 4.1.1.105 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5604 | 0.64 | 33.0 | 4.46e-01 | 96.5% | 96.6% |
| 4220126 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.64 | 38.0 | 4.36e-01 | 97.4% | 78.8% |
| 5034724 | 4.1.1.482 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4314 | 0.64 | 32.0 | 4.48e-01 | 82.5% | 100.0% |
| 3967128 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.64 | 31.0 | 3.92e-01 | 86.0% | 75.7% |
| 3926118 | 4.1.1.223 ↗ | beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st | 0.64 | 34.0 | 4.47e-01 | 98.2% | 98.3% |
| 3511375 | 4.1.1.349 ↗ | beta barrels › SH3 › SH3 › SH3 › ROF | 0.64 | 43.0 | 4.87e-01 | 93.0% | 91.8% |
| 4268386 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 34.0 | 4.20e-01 | 97.4% | 84.3% |
| 5032809 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.63 | 34.0 | 3.33e-01 | 98.2% | 46.2% |
| 3607454 | 220.1.1.306 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_22 | 0.63 | 44.0 | 4.63e-01 | 95.6% | 82.0% |
| 4161673 | 4.1.1.105 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5604 | 0.62 | 33.0 | 3.75e-01 | 96.5% | 67.1% |
| 3227009 | 4.1.1.71 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin7 | 0.62 | 37.0 | 4.35e-01 | 99.1% | 89.3% |
| 3973076 | 109.1.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C | 0.62 | 35.0 | 2.81e-01 | 99.1% | 27.0% |
| 3702154 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 35.0 | 4.19e-01 | 99.1% | 84.0% |
| 3166879 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.62 | 35.0 | 4.49e-01 | 97.4% | 98.5% |
| 3786412 | 4.1.1.344 ↗ | beta barrels › SH3 › SH3 › SH3 › PF31193 | 0.62 | 38.0 | 4.48e-01 | 97.4% | 88.7% |
| 3948209 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 33.0 | 3.89e-01 | 97.4% | 77.3% |
| 3501905 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 41.0 | 4.31e-01 | 98.2% | 78.0% |
| 3578208 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 29.0 | 4.02e-01 | 93.0% | 94.5% |
| 4224041 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.61 | 38.0 | 4.52e-01 | 91.2% | 96.0% |
| 4159881 | 220.1.1.197 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF28623 | 0.60 | 41.0 | 4.40e-01 | 95.6% | 84.2% |
| 3737837 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 34.0 | 4.31e-01 | 93.9% | 98.5% |
| 3970949 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.59 | 30.0 | 3.00e-01 | 74.6% | 48.7% |
| 4497740 | 325.1.7.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C | 0.59 | 30.0 | 4.00e-01 | 85.1% | 93.3% |
| 4537528 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 36.0 | 4.35e-01 | 97.4% | 98.6% |
| 4237578 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.58 | 31.0 | 3.13e-01 | 77.2% | 50.0% |
| 3217772 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 33.0 | 3.68e-01 | 95.6% | 71.8% |
| 3636503 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.58 | 34.0 | 4.21e-01 | 97.4% | 95.7% |
| 4236717 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.58 | 31.0 | 3.10e-01 | 77.2% | 50.0% |
| 5022798 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.57 | 33.0 | 2.21e-01 | 96.5% | 12.9% |
| 3948546 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.57 | 31.0 | 3.38e-01 | 77.2% | 62.0% |
| 4079201 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.57 | 28.0 | 2.89e-01 | 77.2% | 49.1% |
| 3897327 | 2.1.1.241 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rsm22 | 0.57 | 27.0 | 3.77e-01 | 77.2% | 94.5% |
| 4026222 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 46.0 | 4.29e-01 | 95.6% | 69.7% |
| 5032454 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.56 | 35.0 | 3.36e-01 | 98.2% | 54.6% |
| 4966092 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.55 | 29.0 | 2.84e-01 | 74.6% | 46.8% |
| 4016874 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.55 | 39.0 | 2.86e-01 | 72.8% | 69.4% |
| 4606688 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.54 | 30.0 | 3.60e-01 | 86.0% | 81.3% |
| 3737927 | 220.1.1.294 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26663 | 0.54 | 36.0 | 3.70e-01 | 96.5% | 70.0% |
| 3970503 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.54 | 32.0 | 3.07e-01 | 77.2% | 51.9% |
| 4405469 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.53 | 35.0 | 3.81e-01 | 97.4% | 80.0% |
| 3197566 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.53 | 41.0 | 4.41e-01 | 100.0% | 93.0% |
| 3917372 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.53 | 33.0 | 3.85e-01 | 97.4% | 93.3% |
| 5054813 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.52 | 37.0 | 3.02e-01 | 100.0% | 39.5% |
| 3832288 | 4.1.1.81 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM14 | 0.52 | 37.0 | 4.11e-01 | 100.0% | 93.3% |
| 4127839 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.51 | 28.0 | 3.37e-01 | 81.6% | 80.0% |
| 3786775 | 109.54.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › Utp12 | 0.51 | 36.0 | 2.39e-01 | 72.8% | 65.0% |
| 4963006 | 4.1.1.490 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26269 | 0.50 | 36.0 | 3.97e-01 | 100.0% | 100.0% |