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PHAGE-A11--js4906-26-5_S28_scaffold_6_curated_closed_complete_prodigal-single.1__X__X__00207
Bact-VirPHAGE-A11--js4906-26-5_S28_scaffold_6_curated_closed_complete_prodigal-single.1__X__X__00207
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 43-204
Domain cluster:
rep: ON464759.1__UTV60870.1__JDFnp1_82__00082__D31-221
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05708.19 best | Peptidase_C92 | 67.7 | 1.80e-18 | 80.9% | 73.5% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2if6B00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.86 | 74.0 | 7.16e-01 | 90.1% | 98.3% |
| 1df0A02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.60 | 31.0 | 4.00e-01 | 93.2% | 87.0% |
| 2qi2A01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.54 | 30.0 | 3.73e-01 | 96.9% | 84.6% |
| 3obyA01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.53 | 28.0 | 3.42e-01 | 96.9% | 76.1% |
| 3mcaB01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.50 | 27.0 | 3.44e-01 | 96.3% | 87.5% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3221501 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.86 | 75.0 | 7.05e-01 | 90.1% | 97.9% |
| 3388306 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.86 | 75.0 | 7.54e-01 | 89.5% | 98.1% |
| 3983612 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.86 | 74.0 | 7.13e-01 | 89.5% | 99.4% |
| 4946152 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.85 | 77.0 | 7.11e-01 | 93.8% | 98.0% |
| 4935667 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.85 | 74.0 | 7.20e-01 | 89.5% | 98.9% |
| 3979604 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.85 | 75.0 | 7.14e-01 | 92.0% | 97.8% |
| 5013047 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.85 | 80.0 | 7.88e-01 | 97.5% | 98.2% |
| 3988870 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.84 | 73.0 | 7.33e-01 | 90.1% | 98.8% |
| 5033151 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.83 | 75.0 | 7.35e-01 | 92.6% | 97.1% |
| 4477674 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.81 | 71.0 | 7.09e-01 | 99.4% | 89.7% |
| 4009350 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.80 | 72.0 | 6.49e-01 | 93.8% | 94.8% |
| 5028264 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.79 | 74.0 | 6.76e-01 | 98.8% | 98.0% |
| 4034170 | 219.1.1.134 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PF28265 | 0.75 | 68.0 | 6.89e-01 | 93.8% | 96.9% |
| 3278461 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.75 | 71.0 | 6.98e-01 | 99.4% | 97.1% |
| 3754872 | 219.1.1.25 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT | 0.73 | 52.0 | 6.04e-01 | 86.4% | 98.3% |
| 3840585 | 219.1.1.25 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT | 0.66 | 55.0 | 5.19e-01 | 87.0% | 84.2% |
| 3620621 | 219.1.1.80 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF4796_C | 0.63 | 47.0 | 5.12e-01 | 87.7% | 91.9% |
| 3390813 | 219.1.1.80 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF4796_C | 0.63 | 51.0 | 5.28e-01 | 92.0% | 89.0% |
| 3246554 | 219.1.1.80 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF4796_C | 0.62 | 51.0 | 5.35e-01 | 96.3% | 94.0% |
| 3863960 | 219.1.1.80 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF4796_C | 0.62 | 50.0 | 5.16e-01 | 93.8% | 89.0% |
| 3933788 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 24.0 | 3.59e-01 | 88.9% | 100.0% |