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PHAGE-A11--js4906-26-5_S28_scaffold_6_curated_closed_complete_prodigal-single.1__X__X__00241
Bact-VirPHAGE-A11--js4906-26-5_S28_scaffold_6_curated_closed_complete_prodigal-single.1__X__X__00241
Identity
- Kingdom:
- phage
Quality
59.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 27-111
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4z32C02 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.62 | 44.0 | 4.20e-01 | 88.2% | 63.6% |
| 2gsbA01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.61 | 44.0 | 4.43e-01 | 88.2% | 77.4% |
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.61 | 45.0 | 4.37e-01 | 78.8% | 94.7% |
| 3s9xA00 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.59 | 41.0 | 3.35e-01 | 71.8% | 79.2% |
| 1sr4A00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.53 | 36.0 | 2.89e-01 | 70.6% | 43.7% |
| 1q7hA02 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.52 | 38.0 | 3.84e-01 | 78.8% | 93.0% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.51 | 37.0 | 2.84e-01 | 75.3% | 63.3% |
| 8badA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.50 | 34.0 | 2.97e-01 | 71.8% | 68.8% |
| 2nwaA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.50 | 34.0 | 3.61e-01 | 71.8% | 88.0% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3508119 | 214.1.1.9 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7063 | 0.62 | 45.0 | 4.08e-01 | 90.6% | 55.0% |
| 3856441 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.61 | 44.0 | 3.96e-01 | 76.5% | 83.3% |
| 3516794 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.57 | 50.0 | 4.23e-01 | 95.3% | 60.0% |
| 3836457 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.57 | 44.0 | 3.70e-01 | 83.5% | 86.0% |
| 3936761 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.56 | 29.0 | 3.56e-01 | 78.8% | 82.0% |
| None | — | 0.56 | 40.0 | 3.24e-01 | 75.3% | 85.3% | |
| 4979291 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.56 | 34.0 | 3.65e-01 | 74.1% | 69.3% |
| 3586469 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.54 | 36.0 | 3.68e-01 | 83.5% | 68.2% |
| 5025218 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 46.0 | 3.01e-01 | 95.3% | 47.1% |
| 3506773 | 214.1.1.9 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7063 | 0.53 | 45.0 | 4.03e-01 | 95.3% | 65.8% |
| 2124 | 6.1.1.7 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › CDtoxinA | 0.53 | 36.0 | 2.89e-01 | 70.6% | 43.7% |
| 3924975 | 4.1.1.377 ↗ | beta barrels › SH3 › SH3 › SH3 › MSL3_chromo-like | 0.52 | 34.0 | 3.46e-01 | 83.5% | 68.8% |
| 3630782 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.51 | 35.0 | 3.04e-01 | 71.8% | 44.8% |
| 3515855 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.50 | 34.0 | 3.25e-01 | 80.0% | 59.0% |
D2
high
residues 128-230