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PHAGE-A11--js4906-26-5_S28_scaffold_6_curated_closed_complete_prodigal-single.1__X__X__00243
Bact-VirPHAGE-A11--js4906-26-5_S28_scaffold_6_curated_closed_complete_prodigal-single.1__X__X__00243
Identity
- Kingdom:
- phage
Quality
64.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 136-205
Domain cluster:
rep: SRR1747065_scaffold_5_prodigal-single.1__X__X__00020__D265-326
D2
medium
residues 1-102
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3aiiA02 | 2.40.240.100 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › | 0.58 | 36.0 | 4.41e-01 | 73.5% | 100.0% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3057047 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.60 | 40.0 | 4.71e-01 | 79.4% | 98.6% |
| 4197640 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.60 | 38.0 | 4.43e-01 | 88.2% | 92.9% |
| 3304930 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.54 | 40.0 | 3.92e-01 | 77.5% | 99.1% |
D3
medium
residues 527-601
Domain cluster:
rep: SRR1747065_scaffold_5_prodigal-single.1__X__X__00020__D265-326
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3jwhA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 35.0 | 2.64e-01 | 73.3% | 50.8% |
| 3d1pA00 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.50 | 31.0 | 2.76e-01 | 80.0% | 39.2% |
D4
medium
residues 602-657