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PHAGE-A11--js4906-26-5_S28_scaffold_6_curated_closed_complete_prodigal-single.1__X__X__00304
Bact-VirPHAGE-A11--js4906-26-5_S28_scaffold_6_curated_closed_complete_prodigal-single.1__X__X__00304
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 37-93_225-241
Domain cluster:
representative
CATH (57)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fw9A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.82 | 64.0 | 4.19e-01 | 82.4% | 89.0% |
| 3bosB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.78 | 61.0 | 4.68e-01 | 83.8% | 86.4% |
| 2vl7A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.78 | 62.0 | 4.60e-01 | 83.8% | 99.4% |
| 8dgfB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.75 | 57.0 | 4.22e-01 | 82.4% | 76.4% |
| 8fazD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.73 | 55.0 | 3.84e-01 | 79.7% | 84.4% |
| 6eudA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.72 | 52.0 | 3.97e-01 | 77.0% | 100.0% |
| 5o6bB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.71 | 53.0 | 4.05e-01 | 81.1% | 100.0% |
| 3jzmA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 53.0 | 3.66e-01 | 81.1% | 82.3% |
| 3no4A00 | 3.40.50.10310 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Creatininase | 0.69 | 56.0 | 3.83e-01 | 89.2% | 83.7% |
| 3thxB05 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 52.0 | 3.56e-01 | 82.4% | 59.5% |
| 1q3kA00 | 3.40.50.10310 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Creatininase | 0.66 | 52.0 | 3.64e-01 | 87.8% | 86.1% |
| 3of5B00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 54.0 | 3.84e-01 | 89.2% | 51.6% |
| 2db3A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 56.0 | 3.87e-01 | 95.9% | 88.2% |
| 1wp9A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 54.0 | 4.34e-01 | 93.2% | 90.6% |
| 2bdtA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 48.0 | 3.67e-01 | 79.7% | 89.5% |
| 3szuA03 | 3.40.1010.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain | 0.64 | 49.0 | 4.44e-01 | 82.4% | 99.0% |
| 3ua3A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.64 | 48.0 | 3.72e-01 | 82.4% | 65.9% |
| 8alzB05 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 57.0 | 4.11e-01 | 100.0% | 70.7% |
| 4n7bA03 | 3.40.1010.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain | 0.63 | 49.0 | 4.46e-01 | 82.4% | 99.0% |
| 5ul3A01 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.62 | 48.0 | 3.88e-01 | 87.8% | 78.2% |
| 4nf7A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.61 | 49.0 | 3.12e-01 | 87.8% | 82.6% |
| 5bq3A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 44.0 | 3.60e-01 | 81.1% | 85.2% |
| 2hoeA03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.60 | 43.0 | 3.52e-01 | 77.0% | 86.2% |
| 2ekgA02 | 3.20.20.220 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.60 | 48.0 | 3.33e-01 | 86.5% | 84.4% |
| 1xknA00 | 3.75.10.10 | Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A | 0.60 | 43.0 | 2.80e-01 | 77.0% | 92.6% |
| 5djsA03 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.60 | 45.0 | 3.55e-01 | 83.8% | 48.8% |
| 4ru1A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 40.0 | 3.30e-01 | 71.6% | 48.6% |
| 1lwdA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.59 | 47.0 | 2.97e-01 | 89.2% | 78.9% |
| 2wjwA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 42.0 | 3.31e-01 | 77.0% | 52.8% |
| 2dx6A00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.58 | 42.0 | 3.40e-01 | 78.4% | 77.8% |
| 4ag6A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 52.0 | 3.61e-01 | 100.0% | 90.6% |
| 1lbqB01 | 3.40.50.1400 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 44.0 | 3.27e-01 | 85.1% | 53.5% |
| 8jx6B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 51.0 | 3.75e-01 | 100.0% | 80.0% |
| 4wzzA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 42.0 | 3.40e-01 | 81.1% | 84.9% |
| 3blvC00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.56 | 47.0 | 3.10e-01 | 95.9% | 30.6% |
| 1xtiA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 48.0 | 3.78e-01 | 100.0% | 76.8% |
| 3f4aA00 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.55 | 42.0 | 3.51e-01 | 86.5% | 68.8% |
| 2pgxA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 42.0 | 3.26e-01 | 87.8% | 49.7% |
| 1h1lD03 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.55 | 45.0 | 3.77e-01 | 91.9% | 63.2% |
| 6c5cA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 46.0 | 3.59e-01 | 100.0% | 95.1% |
| 4q6jB00 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.55 | 45.0 | 3.15e-01 | 91.9% | 78.5% |
| 3dsaA01 | 3.40.1650.10 | Alpha Beta › 3-Layer(aba) Sandwich › RbsD-like fold › RbsD-like domain | 0.55 | 44.0 | 3.83e-01 | 95.9% | 76.7% |
| 2vgnA02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.54 | 43.0 | 3.70e-01 | 89.2% | 92.1% |
| 4m88A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 46.0 | 3.75e-01 | 94.6% | 73.4% |
| 3ddmA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.54 | 43.0 | 3.04e-01 | 87.8% | 77.3% |
| 1epuA04 | 3.40.50.1910 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sec1/Munc18 (SM) protein, domain 2 | 0.54 | 46.0 | 3.55e-01 | 97.3% | 79.3% |
| 2uv8A01 | 3.90.25.70 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › | 0.53 | 36.0 | 3.37e-01 | 74.3% | 55.9% |
| 2q3fA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 41.0 | 3.23e-01 | 87.8% | 89.4% |
| 5da9A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 38.0 | 2.52e-01 | 79.7% | 45.0% |
| 2f6rA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 46.0 | 3.28e-01 | 100.0% | 87.8% |
| 6acsA00 | 3.40.1180.10 | Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like | 0.52 | 42.0 | 3.05e-01 | 91.9% | 48.4% |
| 1z05A03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 39.0 | 3.08e-01 | 83.8% | 94.7% |
| 3c3kA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 43.0 | 3.59e-01 | 94.6% | 64.5% |
| 3mizB02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 43.0 | 3.49e-01 | 94.6% | 64.6% |
| 4ga6A02 | 1.20.970.50 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › | 0.51 | 38.0 | 3.11e-01 | 83.8% | 50.7% |
| 2js7A01 | 3.40.50.10140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain | 0.50 | 39.0 | 3.29e-01 | 87.8% | 90.4% |
| 3r8eA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.50 | 35.0 | 2.88e-01 | 77.0% | 85.7% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3712546 | 2004.1.1.181 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_7 | 0.89 | 69.0 | 5.03e-01 | 81.1% | 98.3% |
| 5001025 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.89 | 71.0 | 4.73e-01 | 83.8% | 49.0% |
| 5053049 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.88 | 70.0 | 5.07e-01 | 83.8% | 92.4% |
| 3708220 | 2004.1.1.181 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_7 | 0.86 | 68.0 | 4.85e-01 | 83.8% | 86.0% |
| 5032213 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.85 | 67.0 | 4.57e-01 | 82.4% | 78.7% |
| 3607807 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.85 | 67.0 | 4.36e-01 | 82.4% | 68.8% |
| 3932941 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.83 | 65.0 | 4.31e-01 | 83.8% | 92.1% |
| 4996901 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.82 | 63.0 | 4.64e-01 | 82.4% | 89.2% |
| 3221095 | 2004.1.1.135 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 | 0.81 | 64.0 | 5.09e-01 | 83.8% | 98.6% |
| 4864143 | 2004.1.1.127 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TniB | 0.79 | 59.0 | 4.40e-01 | 79.7% | 89.4% |
| 3596424 | 2004.1.1.135 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 | 0.77 | 60.0 | 4.32e-01 | 83.8% | 79.0% |
| 5027315 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.73 | 55.0 | 3.73e-01 | 79.7% | 86.8% |
| 5040728 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.73 | 55.0 | 3.85e-01 | 81.1% | 87.8% |
| 5040727 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.72 | 55.0 | 3.75e-01 | 81.1% | 86.5% |
| 5007980 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.71 | 54.0 | 3.77e-01 | 81.1% | 90.7% |
| 2041913 | 7573.1.1.1 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran | 0.68 | 51.0 | 3.75e-01 | 81.1% | 52.7% |
| 3980670 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.67 | 56.0 | 3.23e-01 | 91.9% | 18.8% |
| 4969518 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.67 | 55.0 | 4.14e-01 | 89.2% | 90.3% |
| 3286902 | 2004.1.1.62 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 | 0.66 | 56.0 | 4.42e-01 | 94.6% | 72.9% |
| 4257805 | 2004.1.1.226 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADDB_N | 0.65 | 57.0 | 3.31e-01 | 100.0% | 32.1% |
| 4335971 | 2004.1.1.226 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADDB_N | 0.65 | 58.0 | 3.30e-01 | 100.0% | 31.6% |
| 4598409 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.64 | 50.0 | 3.47e-01 | 86.5% | 77.0% |
| 3583258 | 2004.1.1.10 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP-synt_ab | 0.64 | 45.0 | 3.54e-01 | 73.0% | 44.6% |
| 3601582 | 7585.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins | 0.64 | 55.0 | 3.90e-01 | 94.6% | 88.8% |
| 3940320 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.63 | 46.0 | 3.29e-01 | 78.4% | 59.1% |
| 3695593 | 7604.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › Hydant_A_N | 0.63 | 50.0 | 4.16e-01 | 87.8% | 91.1% |
| 3518589 | 101.1.2.591 ↗ | alpha arrays › HTH › HTH › winged helix domain › ssDNA_TraI_N | 0.62 | 55.0 | 3.69e-01 | 100.0% | 33.4% |
| 4932425 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.62 | 50.0 | 3.83e-01 | 87.8% | 90.6% |
| 3720265 | 2007.2.3.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Syja_N | 0.61 | 43.0 | 2.89e-01 | 75.7% | 34.9% |
| 4325829 | 7516.1.1.5 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › IspD | 0.61 | 45.0 | 3.24e-01 | 79.7% | 43.0% |
| 4029926 | 7585.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Sec1 | 0.60 | 51.0 | 3.89e-01 | 94.6% | 83.1% |
| 3711265 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.59 | 48.0 | 3.89e-01 | 93.2% | 85.2% |
| 3450147 | 247.1.1.24 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B+Lactamase_B_2 | 0.59 | 50.0 | 3.43e-01 | 97.3% | 60.0% |
| 3243600 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 52.0 | 4.08e-01 | 100.0% | 86.5% |
| 4379372 | 2004.1.1.10 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP-synt_ab | 0.58 | 50.0 | 3.30e-01 | 100.0% | 60.9% |
| 4566371 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.58 | 47.0 | 3.89e-01 | 93.2% | 89.7% |
| 5060575 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.57 | 41.0 | 3.67e-01 | 77.0% | 100.0% |
| 3222773 | 2005.1.1.36 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 | 0.57 | 44.0 | 3.41e-01 | 85.1% | 57.6% |
| 3988071 | 2484.1.1.8 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK | 0.57 | 43.0 | 3.38e-01 | 82.4% | 92.1% |
| 4308615 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.56 | 44.0 | 3.63e-01 | 85.1% | 87.4% |
| 3210647 | 2005.1.1.36 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 | 0.56 | 41.0 | 3.54e-01 | 81.1% | 73.1% |
| 5026936 | 2002.1.1.57 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › URO-D | 0.55 | 42.0 | 2.69e-01 | 79.7% | 34.3% |
| 4016294 | 2485.1.1.1 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin | 0.55 | 45.0 | 3.60e-01 | 89.2% | 47.6% |
| 3243551 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.55 | 42.0 | 3.19e-01 | 86.5% | 44.5% |
| 4528763 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.55 | 42.0 | 3.43e-01 | 82.4% | 87.1% |
| 3933335 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.55 | 37.0 | 2.30e-01 | 71.6% | 64.8% |
| 5049471 | 7574.1.1.5 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_C | 0.55 | 45.0 | 3.43e-01 | 95.9% | 78.5% |
| 4355789 | 2484.1.1.8 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK | 0.54 | 42.0 | 3.32e-01 | 83.8% | 96.8% |
| 3803369 | 7510.1.1.0 ↗ | a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like | 0.54 | 43.0 | 3.70e-01 | 87.8% | 97.5% |
| 181000 | 2484.1.1.8 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK | 0.54 | 41.0 | 3.20e-01 | 83.8% | 89.4% |
| 4000045 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.54 | 45.0 | 3.39e-01 | 94.6% | 62.1% |
| 4974956 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.54 | 41.0 | 3.18e-01 | 86.5% | 45.6% |
| 3925641 | 2005.1.1.36 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 | 0.54 | 39.0 | 3.13e-01 | 81.1% | 56.5% |
| 3549056 | 2005.1.1.36 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 | 0.52 | 41.0 | 3.18e-01 | 87.8% | 75.0% |
| 4246647 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.52 | 36.0 | 3.10e-01 | 74.3% | 71.5% |
| 4423692 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.51 | 41.0 | 3.37e-01 | 87.8% | 82.1% |
| 3717778 | 7585.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Sec1 | 0.51 | 44.0 | 3.74e-01 | 94.6% | 73.3% |
| 3604265 | 3003.1.1.0 ↗ | a+b complex topology › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | 0.50 | 37.0 | 3.54e-01 | 78.4% | 88.2% |
D2
medium
residues 94-224
Domain cluster:
rep: ALT_09252017_20_scaffold_111_prodigal-single.1__X__X__00202__D160-180_203-293
CATH (56)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2bjvA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 48.0 | 4.54e-01 | 77.9% | 60.4% |
| 1vjtA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.65 | 37.0 | 3.91e-01 | 90.8% | 61.2% |
| 1a9xA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 35.0 | 3.70e-01 | 75.6% | 59.5% |
| 3zf8A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.62 | 41.0 | 3.22e-01 | 94.7% | 30.2% |
| 5vlcA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.61 | 37.0 | 3.51e-01 | 71.0% | 49.4% |
| 5vjhB03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 56.0 | 4.68e-01 | 100.0% | 60.1% |
| 5enzA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.60 | 35.0 | 3.30e-01 | 90.8% | 45.3% |
| 5m7oA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 49.0 | 4.52e-01 | 96.2% | 67.5% |
| 2zejB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 38.0 | 4.24e-01 | 71.0% | 82.2% |
| 4zpxA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 53.0 | 4.40e-01 | 98.5% | 85.8% |
| 4d02A02 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.59 | 41.0 | 4.06e-01 | 93.1% | 65.7% |
| 7e0wA01 | 3.40.525.10 | Alpha Beta › 3-Layer(aba) Sandwich › Phosphatidylinositol Transfer Protein Sec14p › CRAL-TRIO lipid binding domain | 0.59 | 41.0 | 3.99e-01 | 96.2% | 63.8% |
| 1in4A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 45.0 | 4.28e-01 | 100.0% | 70.5% |
| 2bgiA02 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.57 | 38.0 | 3.60e-01 | 88.5% | 55.8% |
| 1db3A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 49.0 | 4.19e-01 | 96.9% | 92.2% |
| 3erwF00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 32.0 | 3.25e-01 | 93.1% | 54.2% |
| 1puiA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 48.0 | 4.43e-01 | 93.1% | 81.7% |
| 1kk1A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 48.0 | 4.20e-01 | 93.1% | 86.2% |
| 2q3fA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 47.0 | 4.30e-01 | 92.4% | 88.8% |
| 1mzhA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 44.0 | 3.71e-01 | 94.7% | 49.3% |
| 4aurA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 47.0 | 3.73e-01 | 93.1% | 77.1% |
| 4p4tA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 50.0 | 3.70e-01 | 100.0% | 68.7% |
| 2pz0B00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.55 | 47.0 | 3.87e-01 | 93.9% | 59.7% |
| 5lqdA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 36.0 | 3.09e-01 | 70.2% | 41.5% |
| 2j5bB01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 41.0 | 3.59e-01 | 85.5% | 52.8% |
| 2zw9B01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 48.0 | 3.58e-01 | 98.5% | 69.6% |
| 4cidA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 47.0 | 3.97e-01 | 97.7% | 83.4% |
| 2c0hA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 48.0 | 3.55e-01 | 100.0% | 65.2% |
| 1yumA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 46.0 | 3.90e-01 | 92.4% | 80.7% |
| 2orwB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 39.0 | 3.97e-01 | 91.6% | 78.0% |
| 1ur3M00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.53 | 46.0 | 3.59e-01 | 100.0% | 42.8% |
| 5f2kB02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 47.0 | 4.03e-01 | 99.2% | 84.6% |
| 1t5bB00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.53 | 47.0 | 4.11e-01 | 98.5% | 90.9% |
| 3nbxX01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 49.0 | 4.14e-01 | 100.0% | 67.5% |
| 2hpvA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.53 | 47.0 | 4.04e-01 | 98.5% | 90.8% |
| 4c89C00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 46.0 | 3.47e-01 | 97.7% | 63.4% |
| 1vm8B01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.53 | 43.0 | 3.03e-01 | 89.3% | 32.3% |
| 3lcmB00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.52 | 46.0 | 4.13e-01 | 97.7% | 90.4% |
| 3hpxA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 46.0 | 3.59e-01 | 100.0% | 43.3% |
| 4bxoA01 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 41.0 | 4.08e-01 | 92.4% | 80.7% |
| 3llmA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 42.0 | 3.55e-01 | 86.3% | 92.4% |
| 4lgvA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 44.0 | 3.91e-01 | 91.6% | 85.7% |
| 1r6bX04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 49.0 | 4.20e-01 | 100.0% | 89.3% |
| 1jfxA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 44.0 | 3.82e-01 | 95.4% | 66.8% |
| 3p26A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 45.0 | 3.82e-01 | 96.2% | 79.7% |
| 4id9A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 45.0 | 3.91e-01 | 97.7% | 92.9% |
| 3gl3D00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 34.0 | 3.35e-01 | 90.8% | 63.5% |
| 2xe4A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 44.0 | 3.26e-01 | 96.2% | 57.7% |
| 4rh7A01 | 1.20.920.20 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.51 | 46.0 | 3.31e-01 | 100.0% | 52.8% |
| 1j2rA00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.51 | 43.0 | 3.86e-01 | 92.4% | 94.7% |
| 5vegB00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.51 | 43.0 | 4.18e-01 | 93.1% | 83.9% |
| 3s4tA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.51 | 45.0 | 3.42e-01 | 100.0% | 44.4% |
| 7qjnA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 44.0 | 3.49e-01 | 95.4% | 77.7% |
| 4lyaA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 45.0 | 3.54e-01 | 100.0% | 50.7% |
| 2eplX02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.50 | 43.0 | 3.30e-01 | 93.9% | 48.9% |
| 2xauA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 40.0 | 3.32e-01 | 84.7% | 91.8% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4959355 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.92 | 84.0 | 6.46e-01 | 100.0% | 48.2% |
| 4931164 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.91 | 69.0 | 5.37e-01 | 100.0% | 41.2% |
| 3290930 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.90 | 67.0 | 5.06e-01 | 76.3% | 36.4% |
| 4991153 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.84 | 76.0 | 6.55e-01 | 100.0% | 64.1% |
| 4082548 | 2004.1.1.415 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, RuvB_N | 0.71 | 44.0 | 4.16e-01 | 76.3% | 52.9% |
| 3962695 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.69 | 53.0 | 4.06e-01 | 96.9% | 36.8% |
| 4927696 | 2004.1.1.22 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sigma54_activat | 0.67 | 62.0 | 4.43e-01 | 100.0% | 72.1% |
| 3718987 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.67 | 49.0 | 4.28e-01 | 77.1% | 51.3% |
| 3958312 | 2004.1.1.22 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sigma54_activat | 0.65 | 60.0 | 4.76e-01 | 100.0% | 82.4% |
| 3180991 | 7516.1.1.18 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Anp1 | 0.62 | 43.0 | 3.17e-01 | 97.7% | 26.8% |
| 4948084 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 58.0 | 5.06e-01 | 98.5% | 88.6% |
| 3572298 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 48.0 | 3.64e-01 | 83.2% | 69.4% |
| 3672662 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 39.0 | 3.25e-01 | 77.9% | 37.8% |
| 4391279 | 2004.1.1.153 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2 | 0.59 | 55.0 | 4.54e-01 | 100.0% | 63.6% |
| 3971890 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 50.0 | 4.42e-01 | 90.8% | 88.9% |
| 3739379 | 2004.1.1.189 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 | 0.59 | 43.0 | 3.97e-01 | 76.3% | 61.2% |
| 3553371 | 2004.1.1.164 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Roc | 0.58 | 49.0 | 4.35e-01 | 93.1% | 82.6% |
| 5079688 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 50.0 | 4.33e-01 | 92.4% | 89.7% |
| 3936864 | 2004.1.1.16 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf | 0.58 | 50.0 | 4.44e-01 | 93.9% | 83.8% |
| 2631767 | 7512.1.1.35 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Asp1 | 0.57 | 38.0 | 3.32e-01 | 91.6% | 43.9% |
| None | — | 0.57 | 53.0 | 3.85e-01 | 100.0% | 53.1% | |
| 3290153 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.56 | 53.0 | 4.59e-01 | 100.0% | 83.2% |
| 3594046 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 52.0 | 4.10e-01 | 100.0% | 77.3% |
| 3959685 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 52.0 | 4.70e-01 | 100.0% | 89.7% |
| None | — | 0.56 | 51.0 | 3.97e-01 | 100.0% | 73.2% | |
| 4030223 | 2004.1.1.418 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, Mg_chelatase | 0.55 | 51.0 | 4.00e-01 | 100.0% | 71.1% |
| 3201718 | 109.4.1.1227 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NPHP3_N | 0.55 | 46.0 | 2.68e-01 | 89.3% | 31.8% |
| 1834415 | 2003.1.5.35 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM | 0.55 | 49.0 | 3.65e-01 | 100.0% | 65.6% |
| 4264453 | 2004.1.1.22 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sigma54_activat | 0.55 | 51.0 | 4.37e-01 | 100.0% | 83.0% |
| 3398909 | 7579.1.1.42 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4 | 0.55 | 48.0 | 3.51e-01 | 97.7% | 54.7% |
| 4030963 | 7512.1.1.35 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Asp1 | 0.55 | 38.0 | 3.39e-01 | 91.6% | 49.5% |
| 5036097 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.55 | 39.0 | 3.66e-01 | 93.1% | 57.6% |
| 5025903 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 46.0 | 4.28e-01 | 93.9% | 73.3% |
| 3274543 | 2004.1.1.155 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_3 | 0.54 | 49.0 | 4.15e-01 | 96.9% | 76.8% |
| 3724276 | 2004.1.1.366 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N | 0.54 | 46.0 | 3.72e-01 | 91.6% | 84.9% |
| 5079093 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.54 | 48.0 | 3.80e-01 | 95.4% | 69.0% |
| 3455925 | 2003.1.5.30 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_7 | 0.53 | 40.0 | 3.70e-01 | 84.7% | 61.3% |
| 3825236 | 7579.1.1.92 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1, Abhydrolase_6 | 0.53 | 46.0 | 3.51e-01 | 93.9% | 84.6% |
| 4011936 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 45.0 | 3.80e-01 | 91.6% | 89.5% |
| 3725601 | 2004.1.1.366 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N | 0.53 | 45.0 | 3.67e-01 | 91.6% | 87.3% |
| 3185553 | 2004.1.1.366 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N | 0.53 | 43.0 | 3.55e-01 | 87.0% | 84.7% |
| 3174881 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.53 | 41.0 | 3.48e-01 | 82.4% | 90.7% |
| 5052189 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.53 | 40.0 | 3.80e-01 | 91.6% | 66.3% |
| 3998087 | 2004.1.1.598 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF29907 | 0.53 | 45.0 | 3.96e-01 | 93.9% | 80.5% |
| 3967690 | 2004.1.1.319 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF815 | 0.52 | 48.0 | 4.26e-01 | 99.2% | 84.9% |
| 4032754 | 3979.1.1.0 ↗ | a+b four layers › Mre11 nuclease C-terminal domain › Mre11 nuclease C-terminal domain › Mre11 nuclease C-terminal domain | 0.52 | 32.0 | 3.91e-01 | 72.5% | 100.0% |
| 3449710 | 2003.1.5.30 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_7 | 0.52 | 40.0 | 3.32e-01 | 85.5% | 45.5% |
| None | — | 0.52 | 47.0 | 3.85e-01 | 99.2% | 57.5% | |
| 3689915 | 109.4.1.1227 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NPHP3_N | 0.52 | 46.0 | 2.94e-01 | 94.7% | 21.9% |
| 4248117 | 2004.1.1.28 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK | 0.52 | 41.0 | 4.04e-01 | 96.2% | 79.3% |
| 3690685 | 2004.1.1.366 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N | 0.52 | 44.0 | 3.63e-01 | 91.6% | 84.3% |
| 4467060 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.52 | 47.0 | 3.98e-01 | 100.0% | 69.8% |
| 4488953 | 2004.1.1.139 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Torsin | 0.52 | 46.0 | 4.00e-01 | 96.9% | 79.5% |
| 3911093 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 48.0 | 3.62e-01 | 100.0% | 65.6% |
| 5037967 | 2004.1.1.189 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 | 0.51 | 45.0 | 3.97e-01 | 95.4% | 71.6% |
| 3201326 | 2004.1.1.366 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N | 0.51 | 43.0 | 3.66e-01 | 91.6% | 92.1% |
| 3722994 | 2004.1.1.366 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N | 0.51 | 43.0 | 3.74e-01 | 91.6% | 93.0% |
| 5082287 | 2004.1.1.152 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › KAP_NTPase | 0.51 | 44.0 | 3.86e-01 | 96.2% | 93.5% |
| 5056449 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.51 | 46.0 | 4.08e-01 | 100.0% | 73.7% |
| 4082311 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.51 | 46.0 | 3.97e-01 | 100.0% | 72.7% |
| None | — | 0.51 | 46.0 | 4.20e-01 | 100.0% | 79.4% | |
| 4961268 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.50 | 46.0 | 3.93e-01 | 100.0% | 70.0% |
| 4125316 | 2004.1.1.201 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 | 0.50 | 44.0 | 3.58e-01 | 100.0% | 75.9% |
D3
medium
residues 242-348
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tzvA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.61 | 41.0 | 3.83e-01 | 91.6% | 52.5% |
| 1bjaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 32.0 | 3.36e-01 | 93.5% | 58.9% |
| 1dl5A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 47.0 | 3.87e-01 | 100.0% | 49.3% |
| 2af7D00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.56 | 42.0 | 4.03e-01 | 94.4% | 69.4% |
| 4ms4B01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 44.0 | 3.48e-01 | 89.7% | 86.0% |
| 2ebfX02 | 1.20.140.180 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.54 | 37.0 | 3.43e-01 | 86.0% | 53.8% |
| 4akgA13 | 1.10.8.740 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.54 | 38.0 | 4.16e-01 | 89.7% | 92.9% |
| 4g12A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 38.0 | 3.47e-01 | 74.8% | 87.2% |
| 1gs0A01 | 1.20.142.10 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › Poly(ADP-ribose) polymerase, regulatory domain | 0.53 | 38.0 | 3.60e-01 | 74.8% | 69.0% |
| 4axzA00 | 1.10.3160.10 | Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1 | 0.52 | 43.0 | 3.42e-01 | 90.7% | 56.4% |
| 3djbA01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.51 | 36.0 | 3.74e-01 | 87.9% | 80.2% |
| 3ezuA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.51 | 43.0 | 3.64e-01 | 92.5% | 92.9% |
| 1bqbA02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.51 | 44.0 | 3.99e-01 | 94.4% | 86.8% |
| 2vqxA02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.51 | 45.0 | 3.92e-01 | 99.1% | 82.0% |
| 2yfaA02 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.50 | 40.0 | 3.92e-01 | 87.9% | 85.3% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3216918 | 105.1.1.1 ↗ | alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain › HLH | 0.67 | 45.0 | 4.57e-01 | 93.5% | 69.5% |
| None | — | 0.67 | 45.0 | 4.55e-01 | 93.5% | 69.5% | |
| 3569167 | 3164.1.1.5 ↗ | few secondary structure elements › Zinc-binding domain in Junin virus envelope glycoprotein › Zinc-binding domain in Junin virus envelope glycoprotein › Zinc-binding domain in Junin virus envelope glycoprotein › ZSWIM1-3_helical | 0.64 | 34.0 | 4.20e-01 | 83.2% | 88.3% |
| 5009804 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.59 | 47.0 | 4.97e-01 | 91.6% | 97.9% |
| 4681348 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.58 | 42.0 | 4.39e-01 | 88.8% | 82.0% |
| 5023135 | 101.1.2.97 ↗ | alpha arrays › HTH › HTH › winged helix domain › RPA_C | 0.55 | 33.0 | 3.75e-01 | 100.0% | 84.0% |
| 5033597 | 601.30.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Helical bundle domain in hypothetical protein PH1320 › Helical bundle domain in hypothetical protein PH1320 › NOG1_N | 0.53 | 39.0 | 3.43e-01 | 76.6% | 60.6% |
| 3592519 | 2004.5.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain | 0.52 | 38.0 | 3.14e-01 | 75.7% | 84.2% |
| 3958054 | 633.11.1.0 ↗ | alpha bundles › Bromodomain-like › Nqo1C-terminal domain-like › Nqo1C-terminal domain-like | 0.51 | 35.0 | 3.56e-01 | 87.9% | 71.4% |
D4
medium
residues 404-567