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PHAGE-A11--js4906-26-5_S28_scaffold_6_curated_closed_complete_prodigal-single.1__X__X__00309

Bact-Vir

PHAGE-A11--js4906-26-5_S28_scaffold_6_curated_closed_complete_prodigal-single.1__X__X__00309

Identity

Kingdom:
phage

Quality

83.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-193
PDB
Domain cluster: representative
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8sorA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.61 56.0 4.60e-01 100.0% 66.0%
8amzP01 1.25.40.570 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.61 51.0 4.09e-01 99.5% 45.3%
3woyA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.60 55.0 5.03e-01 100.0% 87.4%
5cwhA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.59 46.0 4.99e-01 93.7% 99.4%
7swlB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 35.0 3.77e-01 73.5% 66.7%
1u6gC00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.58 53.0 3.29e-01 100.0% 19.6%
4cruB00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.58 52.0 4.68e-01 100.0% 83.3%
2r5sA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 28.0 3.92e-01 78.3% 97.7%
3ebbA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.57 52.0 4.67e-01 100.0% 74.2%
4qmhA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.57 52.0 4.86e-01 100.0% 81.4%
6a2aA01 1.50.10.130 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Terpene synthase, N-terminal domain 0.57 37.0 3.69e-01 82.5% 61.1%
3bwtA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.57 51.0 4.30e-01 100.0% 63.4%
3tjzB00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.54 48.0 4.31e-01 100.0% 70.1%
4l7mA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.53 48.0 4.35e-01 100.0% 74.7%
3k9iA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 28.0 3.52e-01 88.9% 90.3%
4epzA00 1.25.40.810 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › UpxZ 0.51 39.0 4.31e-01 85.2% 97.4%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.51 25.0 3.11e-01 77.8% 75.5%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3699309 109.4.1.11 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PI3Ka 0.64 47.0 4.95e-01 95.2% 84.7%
3277087 192.4.1.0 ↗ alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) 0.61 30.0 4.17e-01 81.0% 93.7%
3261087 109.4.1.886 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_DOCK 0.61 55.0 3.84e-01 100.0% 50.2%
3782990 109.4.1.1161 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_MEC1_N 0.58 52.0 4.15e-01 98.4% 54.5%
3410446 109.4.1.517 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Med24_N 0.58 50.0 4.66e-01 92.6% 90.4%
3616573 109.4.1.1633 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › UTP20_C 0.58 52.0 4.06e-01 100.0% 50.7%
3924569 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 39.0 4.48e-01 90.5% 94.3%
5017973 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 41.0 4.56e-01 92.6% 94.0%
3220114 109.4.1.1435 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, VPS15-like_hel 0.55 50.0 4.70e-01 98.9% 100.0%
3713609 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 50.0 4.46e-01 100.0% 74.2%
3778370 109.4.1.35 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT,HEAT_2 0.55 46.0 4.25e-01 98.9% 69.4%
3773029 109.4.1.2861 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_AP5Z1 0.55 44.0 3.85e-01 98.4% 56.1%
3689336 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 44.0 4.45e-01 88.9% 100.0%
4955893 109.10.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Translin › Translin › Translin 0.53 40.0 3.95e-01 77.8% 81.5%
3207960 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 43.0 4.59e-01 98.9% 100.0%
5063672 109.10.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Translin › Translin 0.52 39.0 4.01e-01 94.7% 82.1%
3686087 109.4.1.504 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ndc1_Nup 0.52 44.0 4.31e-01 89.9% 99.5%
3712503 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 47.0 4.02e-01 100.0% 73.4%
3630724 109.4.1.504 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ndc1_Nup 0.50 45.0 4.22e-01 97.4% 98.3%