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PHAGE-A3--js4906-20-2_S1_scaffold_104-98_curated_closed_complete_prodigal-single.1__X__X__00135
Bact-VirPHAGE-A3--js4906-20-2_S1_scaffold_104-98_curated_closed_complete_prodigal-single.1__X__X__00135
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-106
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gw6A02 | 1.20.5.1240 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Endo-n-acetylneuraminidase | 0.64 | 34.0 | 4.37e-01 | 81.2% | 96.2% |
| 3bvoB01 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.52 | 39.0 | 3.95e-01 | 100.0% | 78.6% |
| 1xb4B01 | 1.10.10.570 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › """Winged helix"" DNA-binding domain. Chain C. Domain 1" | 0.52 | 32.0 | 3.13e-01 | 100.0% | 54.8% |
| 4ppuA00 | 1.10.590.10 | Mainly Alpha › Orthogonal Bundle › Chorismate Mutase, subunit A › Chorismate mutase, AroQ class superfamily, eukaryotic | 0.51 | 42.0 | 3.26e-01 | 96.9% | 79.6% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3677582 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.58 | 44.0 | 3.23e-01 | 94.8% | 29.4% |
| 4026610 | 4250.1.1.1 ↗ | alpha bundles › Duffy-binding-like domain, N-terminal subdomain › Duffy-binding-like domain, N-terminal subdomain › Duffy-binding-like domain, N-terminal subdomain › Duffy_binding | 0.56 | 49.0 | 3.56e-01 | 100.0% | 44.0% |
| 4537299 | 621.1.1.3 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Sey1_3HB | 0.53 | 46.0 | 3.07e-01 | 100.0% | 23.8% |
| 3470585 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.51 | 40.0 | 3.00e-01 | 87.5% | 78.5% |