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PHAGE-A3--js4906-20-2_S1_scaffold_104-98_curated_closed_complete_prodigal-single.1__X__X__00205

Bact-Vir

PHAGE-A3--js4906-20-2_S1_scaffold_104-98_curated_closed_complete_prodigal-single.1__X__X__00205

Identity

Kingdom:
phage

Quality

83.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-85
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2dfuA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.54 24.0 3.07e-01 94.0% 72.7%
5li7A00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.54 40.0 2.67e-01 81.0% 67.8%
3kl9A01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.52 39.0 2.86e-01 84.5% 76.6%
1xjvA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 37.0 3.14e-01 77.4% 89.4%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3491232 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.56 41.0 3.32e-01 81.0% 47.2%
3595314 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.50 36.0 2.42e-01 78.6% 24.8%
D2 high residues 97-145
PDB