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PHAGE-A4--js4906-25-3_S22_scaffold_24_curated_closed_complete_prodigal-single.1__X__X__00208
Bact-VirPHAGE-A4--js4906-25-3_S22_scaffold_24_curated_closed_complete_prodigal-single.1__X__X__00208
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 32-121
Domain cluster:
rep: BML_08042016_6_5m_scaffold_2_prodigal-single.1__X__X__00137__D21-104
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1f00I03 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.76 | 70.0 | 6.79e-01 | 100.0% | 96.9% |
| 3m9zA00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.73 | 68.0 | 6.06e-01 | 100.0% | 84.7% |
| 1fvuB00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.73 | 68.0 | 6.09e-01 | 100.0% | 86.0% |
| 5ktiA00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.71 | 66.0 | 5.55e-01 | 100.0% | 79.2% |
| 1byfA00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.70 | 65.0 | 5.82e-01 | 100.0% | 93.5% |
| 4ak8A00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.70 | 65.0 | 5.69e-01 | 100.0% | 86.9% |
| 2vuvA00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.69 | 64.0 | 5.60e-01 | 100.0% | 86.0% |
| 2pf5D00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.66 | 60.0 | 5.94e-01 | 100.0% | 94.8% |
| 3zuaA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.60 | 41.0 | 3.69e-01 | 72.2% | 85.5% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.59 | 33.0 | 4.24e-01 | 94.4% | 96.2% |
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 34.0 | 4.05e-01 | 90.0% | 84.1% |
| 1igqB00 | 2.30.30.150 | Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain | 0.58 | 35.0 | 4.19e-01 | 80.0% | 94.7% |
| 5i4eA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.57 | 30.0 | 4.04e-01 | 91.1% | 100.0% |
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 31.0 | 3.86e-01 | 73.3% | 89.3% |
| 2do3A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 31.0 | 4.00e-01 | 85.6% | 98.0% |
| 3goxA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 32.0 | 4.05e-01 | 73.3% | 100.0% |
| 6bogA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 32.0 | 4.03e-01 | 87.8% | 100.0% |
| 1mhnA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 34.0 | 4.07e-01 | 87.8% | 94.9% |
| 4fw1A02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.54 | 32.0 | 4.02e-01 | 72.2% | 98.1% |
| 1pz4A00 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.53 | 38.0 | 3.55e-01 | 75.6% | 88.5% |
| 2eczA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 32.0 | 3.65e-01 | 94.4% | 80.0% |
| 2ckkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 31.0 | 3.82e-01 | 73.3% | 100.0% |
| 2diqA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 35.0 | 3.40e-01 | 93.3% | 62.0% |
| 5ygbA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 35.0 | 3.72e-01 | 93.3% | 80.0% |
| 6s8zA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 34.0 | 3.89e-01 | 91.1% | 98.4% |
| 2pljA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.51 | 41.0 | 3.21e-01 | 92.2% | 88.6% |
| 1yn8A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 32.0 | 3.86e-01 | 96.7% | 96.6% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 35.0 | 3.99e-01 | 96.7% | 100.0% |
| 2ffgA00 | 3.30.720.20 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 | 0.50 | 37.0 | 3.87e-01 | 92.2% | 87.5% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 34.0 | 3.71e-01 | 95.6% | 86.3% |
| 7u32F02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.50 | 28.0 | 3.57e-01 | 94.4% | 98.0% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 34.0 | 3.90e-01 | 93.3% | 100.0% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4532283 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.84 | 79.0 | 7.49e-01 | 100.0% | 92.4% |
| 5080286 | 209.1.1.25 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lcl_C | 0.83 | 79.0 | 6.84e-01 | 100.0% | 71.5% |
| 3976043 | 209.1.1.6 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › InvE_AD | 0.79 | 75.0 | 6.37e-01 | 100.0% | 78.5% |
| 3980715 | 209.1.1.6 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › InvE_AD | 0.78 | 73.0 | 6.20e-01 | 100.0% | 77.1% |
| 3976063 | 209.1.1.6 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › InvE_AD | 0.77 | 72.0 | 6.18e-01 | 100.0% | 77.8% |
| 2066820 | 209.1.1.6 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › InvE_AD | 0.77 | 72.0 | 6.23e-01 | 100.0% | 79.7% |
| 3978182 | 209.1.1.6 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › InvE_AD | 0.75 | 70.0 | 5.91e-01 | 100.0% | 80.7% |
| 3908637 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.72 | 67.0 | 5.72e-01 | 100.0% | 80.0% |
| 3568994 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.71 | 66.0 | 5.49e-01 | 100.0% | 84.0% |
| 4015023 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.71 | 65.0 | 5.85e-01 | 100.0% | 75.0% |
| 3238557 | 209.1.1.14 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › PF29411 | 0.69 | 63.0 | 4.98e-01 | 100.0% | 84.6% |
| 3223193 | 209.1.1.14 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › PF29411 | 0.66 | 60.0 | 4.79e-01 | 100.0% | 84.6% |
| 3617111 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.63 | 40.0 | 4.01e-01 | 94.4% | 63.3% |
| 3581143 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.59 | 34.0 | 3.98e-01 | 86.7% | 80.0% |
| 4580772 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.59 | 37.0 | 3.84e-01 | 93.3% | 67.1% |
| 3261395 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 34.0 | 4.13e-01 | 87.8% | 89.7% |
| 3877938 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.59 | 37.0 | 3.77e-01 | 93.3% | 64.4% |
| 3620094 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 34.0 | 4.23e-01 | 76.7% | 94.5% |
| 3340900 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 36.0 | 4.15e-01 | 91.1% | 86.2% |
| 3577505 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 37.0 | 3.86e-01 | 93.3% | 69.4% |
| 3881123 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.57 | 35.0 | 3.68e-01 | 94.4% | 65.9% |
| 4524466 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.56 | 35.0 | 3.95e-01 | 91.1% | 81.4% |
| 3877485 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.56 | 35.0 | 3.66e-01 | 92.2% | 68.2% |
| 3398093 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.56 | 34.0 | 4.07e-01 | 90.0% | 93.3% |
| 3501699 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 38.0 | 4.04e-01 | 94.4% | 80.0% |
| 3601532 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.55 | 41.0 | 2.70e-01 | 83.3% | 47.3% |
| 3562168 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.55 | 35.0 | 3.59e-01 | 93.3% | 65.6% |
| 4058174 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.54 | 37.0 | 4.17e-01 | 95.6% | 96.9% |
| 4420173 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.54 | 35.0 | 3.78e-01 | 91.1% | 78.7% |
| 3389169 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.54 | 37.0 | 3.82e-01 | 94.4% | 75.3% |
| 6510 | 268.1.1.1 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 | 0.53 | 38.0 | 3.55e-01 | 75.6% | 88.5% |
| 3883161 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.52 | 36.0 | 3.69e-01 | 94.4% | 72.2% |
| 3571064 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.52 | 37.0 | 3.85e-01 | 94.4% | 78.8% |
| 3907619 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.52 | 36.0 | 3.68e-01 | 94.4% | 74.1% |
| 3393347 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.52 | 36.0 | 3.65e-01 | 93.3% | 71.1% |
| 3267329 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 36.0 | 3.24e-01 | 96.7% | 51.2% |
| 3576438 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 37.0 | 3.80e-01 | 94.4% | 75.6% |
| 3535190 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.52 | 36.0 | 3.64e-01 | 95.6% | 72.2% |
| 4026282 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.52 | 35.0 | 3.55e-01 | 94.4% | 70.0% |
| 3188732 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.52 | 33.0 | 3.58e-01 | 96.7% | 77.3% |
| 3971932 | 5084.3.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter | 0.51 | 41.0 | 2.47e-01 | 86.7% | 43.8% |
| 3213828 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.51 | 37.0 | 3.45e-01 | 75.6% | 71.8% |
| 3514970 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.51 | 36.0 | 3.62e-01 | 95.6% | 73.3% |
| 3997949 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.51 | 36.0 | 3.61e-01 | 94.4% | 73.3% |
| 3910433 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 34.0 | 3.84e-01 | 92.2% | 98.5% |
| 3322598 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.50 | 34.0 | 2.60e-01 | 70.0% | 84.8% |
| 3622137 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.50 | 37.0 | 3.74e-01 | 95.6% | 76.7% |
| 4438983 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.50 | 34.0 | 3.41e-01 | 94.4% | 66.3% |