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PHAGE-A4--js4906-25-3_S22_scaffold_24_curated_closed_complete_prodigal-single.1__X__X__00254
Bact-VirPHAGE-A4--js4906-25-3_S22_scaffold_24_curated_closed_complete_prodigal-single.1__X__X__00254
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-20_126-179
Domain cluster:
rep: NC_019411.1__YP_006989739.1__D870_gp006__00006__D3-23_141-178
CATH (50)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6g1nD01 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.79 | 59.0 | 5.57e-01 | 84.3% | 66.3% |
| 3htvA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.75 | 53.0 | 4.50e-01 | 74.3% | 52.3% |
| 2konA00 | 3.30.160.350 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.74 | 57.0 | 5.47e-01 | 84.3% | 90.2% |
| 4eo3A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.71 | 52.0 | 4.14e-01 | 77.1% | 85.5% |
| 2a9sB00 | 3.90.950.20 | Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like | 0.71 | 58.0 | 4.38e-01 | 88.6% | 82.4% |
| 1h4iA00 | 2.140.10.10 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Quinoprotein alcohol dehydrogenase-like superfamily | 0.71 | 53.0 | 3.07e-01 | 78.6% | 14.3% |
| 3hrgA02 | 3.30.420.260 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain | 0.70 | 48.0 | 4.11e-01 | 74.3% | 43.9% |
| 4ozuA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.70 | 53.0 | 3.33e-01 | 80.0% | 23.6% |
| 3dsmA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.70 | 52.0 | 3.30e-01 | 78.6% | 20.5% |
| 2xu7A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.70 | 52.0 | 3.22e-01 | 78.6% | 20.0% |
| 4pswB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.70 | 52.0 | 3.21e-01 | 78.6% | 19.7% |
| 1olzA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.70 | 52.0 | 3.09e-01 | 78.6% | 19.2% |
| 1q7fB00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.69 | 51.0 | 3.32e-01 | 77.1% | 25.5% |
| 2ap1A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.69 | 51.0 | 4.11e-01 | 80.0% | 40.3% |
| 2i0rA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.68 | 53.0 | 3.34e-01 | 82.9% | 21.2% |
| 5b4wA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.68 | 50.0 | 3.07e-01 | 78.6% | 20.5% |
| 1mg2A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.68 | 50.0 | 3.12e-01 | 78.6% | 17.8% |
| 2hesX00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.68 | 51.0 | 3.27e-01 | 80.0% | 23.1% |
| 4u1eI00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.68 | 51.0 | 3.24e-01 | 80.0% | 21.2% |
| 8eg0B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.68 | 51.0 | 3.20e-01 | 80.0% | 19.4% |
| 1shyB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.67 | 54.0 | 3.20e-01 | 84.3% | 21.8% |
| 1nrjA00 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.67 | 53.0 | 4.25e-01 | 90.0% | 43.5% |
| 5fmgA00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.67 | 46.0 | 3.18e-01 | 71.4% | 24.2% |
| 4o9dA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.66 | 53.0 | 3.26e-01 | 85.7% | 17.6% |
| 4mdaA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.66 | 50.0 | 3.65e-01 | 82.9% | 33.0% |
| 1jyaB00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.65 | 53.0 | 4.52e-01 | 92.9% | 95.0% |
| 2gupA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.64 | 43.0 | 3.99e-01 | 72.9% | 51.5% |
| 2cn2A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.64 | 46.0 | 2.90e-01 | 77.1% | 23.0% |
| 7uhyA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.64 | 47.0 | 3.06e-01 | 78.6% | 23.2% |
| 3dpuB03 | 3.30.310.200 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.63 | 44.0 | 3.83e-01 | 72.9% | 85.2% |
| 3qijB03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 41.0 | 3.76e-01 | 74.3% | 52.8% |
| 2xzhA00 | 2.130.10.110 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain | 0.61 | 47.0 | 2.98e-01 | 82.9% | 19.0% |
| 2aq5A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 47.0 | 3.04e-01 | 84.3% | 22.3% |
| 2wzoA01 | 3.30.160.360 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 48.0 | 4.01e-01 | 94.3% | 49.6% |
| 2qdsA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.58 | 40.0 | 2.82e-01 | 71.4% | 92.9% |
| 3hkmB00 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.58 | 40.0 | 2.90e-01 | 72.9% | 23.9% |
| 3dnsA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.58 | 44.0 | 3.61e-01 | 82.9% | 71.8% |
| 2nn6C00 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.57 | 47.0 | 3.15e-01 | 90.0% | 30.7% |
| 2vseA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.57 | 47.0 | 3.68e-01 | 88.6% | 85.9% |
| 4kzsA03 | 3.30.160.710 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 45.0 | 4.13e-01 | 90.0% | 81.4% |
| 2b5eA02 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 41.0 | 3.74e-01 | 78.6% | 97.9% |
| 5jicA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 47.0 | 3.42e-01 | 92.9% | 54.4% |
| 2yzyA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.54 | 38.0 | 2.87e-01 | 72.9% | 74.8% |
| 2e63A00 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.53 | 43.0 | 3.31e-01 | 91.4% | 69.4% |
| 2x5gA00 | 3.30.720.60 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.53 | 37.0 | 3.41e-01 | 72.9% | 57.1% |
| 4dsdA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.53 | 42.0 | 3.36e-01 | 82.9% | 58.7% |
| 5cemA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 38.0 | 3.75e-01 | 75.7% | 84.9% |
| 2x0qA01 | 3.30.310.280 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.52 | 45.0 | 3.56e-01 | 91.4% | 96.2% |
| 2hjjA00 | 3.30.160.130 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › ykff protein like domains | 0.52 | 38.0 | 3.93e-01 | 84.3% | 86.4% |
| 2p90A01 | 3.40.50.10900 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit | 0.52 | 40.0 | 2.92e-01 | 88.6% | 86.2% |
ECOD (70)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4297945 | 4325.1.1.1 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 | 0.81 | 56.0 | 6.25e-01 | 77.1% | 92.7% |
| 4977068 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.80 | 37.0 | 3.21e-01 | 81.4% | 30.8% |
| 4188237 | 4325.1.1.1 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 | 0.78 | 54.0 | 6.02e-01 | 75.7% | 92.7% |
| 3284714 | 4325.1.1.1 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 | 0.77 | 56.0 | 5.87e-01 | 78.6% | 84.1% |
| 7726 | 4325.1.1.1 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 | 0.76 | 54.0 | 5.88e-01 | 74.3% | 91.4% |
| 4948056 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 35.0 | 3.07e-01 | 81.4% | 32.0% |
| 3945074 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.73 | 54.0 | 3.42e-01 | 78.6% | 21.5% |
| 2443927 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.72 | 53.0 | 3.18e-01 | 77.1% | 20.9% |
| 3607492 | 5.1.4.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,DUF1899,WD40_4 | 0.72 | 54.0 | 3.32e-01 | 80.0% | 19.2% |
| 3695026 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.72 | 52.0 | 4.30e-01 | 75.7% | 76.5% |
| 3495535 | 5.1.2.54 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Beta-prop_WDR19_1st | 0.71 | 53.0 | 3.93e-01 | 78.6% | 41.8% |
| 3759644 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.71 | 53.0 | 3.15e-01 | 78.6% | 19.6% |
| 3637599 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.71 | 52.0 | 3.17e-01 | 78.6% | 21.7% |
| 5007469 | 5.1.11.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta_propel | 0.71 | 53.0 | 3.12e-01 | 78.6% | 20.9% |
| 3275356 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.70 | 52.0 | 3.18e-01 | 78.6% | 18.8% |
| 3939041 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.70 | 52.0 | 3.29e-01 | 78.6% | 21.2% |
| 5028369 | 5.1.4.87 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › LVIVD | 0.70 | 53.0 | 3.49e-01 | 80.0% | 25.2% |
| 3710572 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.70 | 52.0 | 3.27e-01 | 78.6% | 22.3% |
| 3356976 | 5.1.5.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PQQ,PQQ_2 | 0.70 | 52.0 | 3.05e-01 | 78.6% | 16.7% |
| 3382790 | 12.3.1.19 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 | 0.70 | 54.0 | 3.74e-01 | 84.3% | 97.4% |
| 5055395 | 5.1.4.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 | 0.70 | 52.0 | 3.21e-01 | 78.6% | 18.3% |
| 3513816 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.69 | 55.0 | 3.30e-01 | 85.7% | 31.0% |
| 3784575 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.69 | 55.0 | 3.37e-01 | 85.7% | 59.5% |
| 3926070 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.69 | 55.0 | 3.46e-01 | 85.7% | 21.7% |
| 3638345 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.69 | 55.0 | 3.37e-01 | 85.7% | 21.7% |
| 3711674 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.69 | 51.0 | 3.16e-01 | 78.6% | 19.2% |
| 3744900 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.68 | 51.0 | 3.29e-01 | 78.6% | 25.3% |
| 3765357 | 5.1.4.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,DUF1899,WD40_4 | 0.68 | 53.0 | 3.29e-01 | 84.3% | 19.3% |
| 3871110 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.68 | 54.0 | 2.99e-01 | 84.3% | 9.2% |
| None | — | 0.68 | 52.0 | 3.36e-01 | 81.4% | 29.0% | |
| 4432835 | 5.1.5.117 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Nup88 | 0.68 | 53.0 | 3.17e-01 | 84.3% | 22.4% |
| 3335750 | 5.1.10.9 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › Clathrin_propel | 0.68 | 46.0 | 4.39e-01 | 82.9% | 58.8% |
| 3396994 | 5.1.4.382 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, DUF1899, ANAPC4_WD40, WD40_4 | 0.68 | 53.0 | 3.28e-01 | 84.3% | 19.0% |
| 4075924 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.68 | 54.0 | 4.59e-01 | 88.6% | 53.0% |
| 3301393 | 5.1.5.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PQQ_2 | 0.67 | 50.0 | 2.95e-01 | 78.6% | 16.7% |
| 4933788 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.67 | 46.0 | 3.30e-01 | 71.4% | 44.3% |
| 4944463 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.67 | 47.0 | 3.93e-01 | 72.9% | 49.2% |
| 4390303 | 5.1.3.238 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF29568 | 0.67 | 53.0 | 3.06e-01 | 84.3% | 13.8% |
| 3550096 | 5.1.4.425 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR19_1st | 0.67 | 52.0 | 3.28e-01 | 84.3% | 20.0% |
| 3671367 | 5.1.4.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Clathrin_propel | 0.67 | 55.0 | 3.43e-01 | 88.6% | 20.6% |
| 3644862 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 55.0 | 3.42e-01 | 90.0% | 23.2% |
| 3810743 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.66 | 49.0 | 3.33e-01 | 78.6% | 33.5% |
| 3642552 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.65 | 45.0 | 3.16e-01 | 71.4% | 30.7% |
| 4001956 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.65 | 51.0 | 3.11e-01 | 82.9% | 19.2% |
| 3475704 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.65 | 53.0 | 3.37e-01 | 90.0% | 24.8% |
| 3901561 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.64 | 48.0 | 3.04e-01 | 78.6% | 21.2% |
| 3486078 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.64 | 57.0 | 3.63e-01 | 100.0% | 28.3% |
| 3915668 | 330.1.1.19 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_2 | 0.64 | 49.0 | 4.59e-01 | 84.3% | 78.9% |
| 3219424 | 5.1.4.585 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF29539, PF29566 | 0.63 | 50.0 | 3.00e-01 | 90.0% | 12.0% |
| 3833006 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.63 | 46.0 | 3.08e-01 | 95.7% | 18.1% |
| 3778542 | 5.1.4.34 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup88 | 0.63 | 52.0 | 3.17e-01 | 95.7% | 24.0% |
| 3719418 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.63 | 47.0 | 2.86e-01 | 80.0% | 11.9% |
| 3923579 | 5.1.4.167 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR19_1st | 0.63 | 49.0 | 3.10e-01 | 84.3% | 24.7% |
| 3815390 | 5.3.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › S_locus_glycop | 0.62 | 46.0 | 3.68e-01 | 80.0% | 87.6% |
| 3899879 | 5.1.3.9 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › OLF | 0.62 | 45.0 | 3.04e-01 | 78.6% | 28.6% |
| 4025506 | 5.1.4.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,DUF1899,WD40_4 | 0.62 | 51.0 | 3.15e-01 | 90.0% | 23.0% |
| 3743269 | 5.1.4.561 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, CRT10 | 0.62 | 54.0 | 3.30e-01 | 95.7% | 26.7% |
| 3541838 | 5.1.4.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,DUF1899,WD40_4 | 0.60 | 52.0 | 2.95e-01 | 100.0% | 15.9% |
| 3719029 | 5.1.8.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 | 0.60 | 46.0 | 3.57e-01 | 84.3% | 42.4% |
| 3515415 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 51.0 | 2.89e-01 | 100.0% | 19.3% |
| 3803793 | 5.1.5.66 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_1 | 0.59 | 48.0 | 3.17e-01 | 88.6% | 27.5% |
| 3683970 | 5.3.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › S_locus_glycop | 0.59 | 45.0 | 3.56e-01 | 82.9% | 84.1% |
| 3738714 | 220.1.1.74 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H | 0.57 | 42.0 | 3.69e-01 | 84.3% | 50.9% |
| 3313933 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.57 | 45.0 | 3.01e-01 | 97.1% | 20.0% |
| 5012312 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 40.0 | 3.03e-01 | 74.3% | 41.9% |
| 3935926 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.56 | 37.0 | 2.48e-01 | 70.0% | 17.2% |
| 3334421 | 5.3.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II | 0.55 | 42.0 | 3.48e-01 | 82.9% | 84.6% |
| 2027 | 12.3.1.17 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › RhgB_N | 0.54 | 42.0 | 2.91e-01 | 87.1% | 80.8% |
| 3254115 | 5.1.4.56 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › NUP214 | 0.53 | 45.0 | 2.83e-01 | 100.0% | 92.4% |
| 3594316 | 245.1.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C | 0.51 | 42.0 | 3.98e-01 | 94.3% | 98.8% |
D2
high
residues 25-123
Domain cluster:
rep: OL955261.1__UIS25313.1__X__00113__D38-169
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4tqrA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.62 | 32.0 | 3.28e-01 | 100.0% | 48.0% |
| 4g3wA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.58 | 52.0 | 4.69e-01 | 100.0% | 97.1% |
| 3v3sA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.58 | 51.0 | 3.78e-01 | 100.0% | 97.0% |
| 3o5yB00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.57 | 51.0 | 4.51e-01 | 100.0% | 85.0% |
| 1wvfA03 | 3.40.462.10 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidases, C-terminal domain | 0.56 | 45.0 | 3.49e-01 | 88.9% | 82.3% |
| 2xvlA01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.55 | 45.0 | 3.45e-01 | 89.9% | 96.2% |
| 4bbyA05 | 3.30.300.330 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.54 | 40.0 | 3.93e-01 | 77.8% | 94.4% |
| 4qwoB00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.54 | 48.0 | 4.38e-01 | 100.0% | 99.2% |
| 1qltA03 | 3.40.462.10 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidases, C-terminal domain | 0.54 | 43.0 | 3.37e-01 | 88.9% | 81.8% |
| 4ctaA02 | 3.30.70.2860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 28.0 | 3.15e-01 | 99.0% | 64.0% |
| 3k2nA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.53 | 47.0 | 3.94e-01 | 100.0% | 80.8% |
| 3d3bJ00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.52 | 30.0 | 3.23e-01 | 71.7% | 65.5% |
| 3dkxA01 | 3.40.1310.30 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.52 | 31.0 | 2.87e-01 | 96.0% | 44.0% |
| 4um8B02 | 2.60.40.1510 | Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 | 0.51 | 33.0 | 3.01e-01 | 70.7% | 47.5% |
| 3lmbA01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.50 | 34.0 | 2.88e-01 | 100.0% | 43.3% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5027042 | 304.19.1.1 ↗ | a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha | 0.65 | 34.0 | 3.64e-01 | 100.0% | 56.8% |
| 3645719 | 223.1.1.79 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_NLP | 0.62 | 56.0 | 4.50e-01 | 100.0% | 85.1% |
| 3170786 | 223.2.1.18 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Longin_2 | 0.55 | 47.0 | 3.94e-01 | 94.9% | 69.7% |
| 3629626 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.55 | 37.0 | 3.37e-01 | 71.7% | 91.7% |
| 4024940 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 38.0 | 3.21e-01 | 73.7% | 94.1% |
| 4007550 | 223.1.1.162 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PF30420 | 0.54 | 40.0 | 3.22e-01 | 78.8% | 46.7% |
| 3727442 | 101.1.2.569 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF28722 | 0.53 | 45.0 | 4.17e-01 | 98.0% | 72.8% |
| 3950100 | 223.3.1.0 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins | 0.52 | 47.0 | 4.02e-01 | 100.0% | 95.0% |
| 4292806 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.52 | 36.0 | 3.55e-01 | 70.7% | 77.1% |
| 2858695 | 331.3.1.19 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VanA_C | 0.52 | 43.0 | 3.20e-01 | 88.9% | 76.7% |
| 3875204 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 34.0 | 3.02e-01 | 70.7% | 45.5% |
| 4438073 | 304.18.1.0 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS | 0.52 | 29.0 | 3.15e-01 | 72.7% | 65.1% |
| 3309702 | 207.1.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 | 0.51 | 37.0 | 2.37e-01 | 77.8% | 31.7% |
| 3366280 | 304.8.1.47 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR9_3rd | 0.50 | 35.0 | 3.50e-01 | 70.7% | 82.0% |