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PHAGE-A4--js4906-25-3_S22_scaffold_24_curated_closed_complete_prodigal-single.1__X__X__00302
Bact-VirPHAGE-A4--js4906-25-3_S22_scaffold_24_curated_closed_complete_prodigal-single.1__X__X__00302
Identity
- Kingdom:
- phage
Quality
81.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 59-165
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4c92C00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 39.0 | 4.45e-01 | 72.0% | 83.5% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 35.0 | 4.09e-01 | 72.0% | 84.7% |
| 1whlA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.56 | 40.0 | 4.26e-01 | 75.7% | 85.3% |
| 1v1qA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 36.0 | 3.61e-01 | 72.0% | 62.7% |
| 3eyrA00 | 3.15.10.40 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Uncharacterised protein PF07273 family, DUF1439 | 0.52 | 36.0 | 3.15e-01 | 71.0% | 68.0% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.51 | 30.0 | 2.93e-01 | 97.2% | 50.8% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3168781 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.66 | 42.0 | 4.32e-01 | 74.8% | 65.7% |
| 3721700 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 49.0 | 4.26e-01 | 85.0% | 76.9% |
| 3344144 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.60 | 34.0 | 3.88e-01 | 99.1% | 72.6% |
| 3886492 | 4.1.1.154 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4772 | 0.60 | 34.0 | 4.01e-01 | 73.8% | 80.0% |
| 3938484 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 37.0 | 3.62e-01 | 84.1% | 56.7% |
| 3736916 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 48.0 | 4.22e-01 | 90.7% | 81.9% |
| 3190995 | 4.8.1.22 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 | 0.56 | 50.0 | 4.22e-01 | 97.2% | 72.0% |
| 4012953 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.56 | 49.0 | 4.39e-01 | 96.3% | 69.3% |
| 3483566 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 43.0 | 4.36e-01 | 82.2% | 96.2% |
| 3472685 | 3324.1.1.2 ↗ | extended segments › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases | 0.55 | 43.0 | 3.22e-01 | 82.2% | 46.7% |
| 4013325 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.55 | 44.0 | 4.24e-01 | 86.9% | 82.4% |
| 3489971 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 37.0 | 3.57e-01 | 71.0% | 70.0% |