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PHAGE-A4--js4906-25-3_S22_scaffold_24_curated_closed_complete_prodigal-single.1__X__X__00382

Bact-Vir

PHAGE-A4--js4906-25-3_S22_scaffold_24_curated_closed_complete_prodigal-single.1__X__X__00382

Identity

Kingdom:
phage

Quality

93.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-128
PDB
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4dkkA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 28.0 3.54e-01 90.4% 75.7%
3u4vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 34.0 3.54e-01 98.4% 64.7%
2jkbA02 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.54 40.0 2.84e-01 96.0% 25.6%
3en2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 32.0 3.74e-01 99.2% 85.7%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3237754 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.57 29.0 3.37e-01 91.2% 67.8%
4310314 304.7.1.0 ↗ a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.56 24.0 3.61e-01 100.0% 94.5%
4024062 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 29.0 3.59e-01 98.4% 89.2%
3213392 389.1.2.19 ↗ few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › DUF281 0.51 28.0 3.24e-01 100.0% 71.6%