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PHAGE-A6--js4906-27-3_S30_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00011

Bact-Vir

PHAGE-A6--js4906-27-3_S30_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00011

Identity

Kingdom:
phage

Quality

81.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-94
PDB
Domain cluster: rep: PHAGE-A6--js4906-27-3_S30_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00049__D14-85
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7xlqD01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.55 40.0 3.49e-01 79.0% 50.4%
1r4qA01 3.40.420.10 Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 0.52 45.0 3.55e-01 96.3% 72.2%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4940661 7575.1.1.4 ↗ a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C11 0.57 42.0 2.75e-01 79.0% 18.7%
5080417 7575.1.1.0 ↗ a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like 0.56 41.0 2.64e-01 79.0% 17.5%
5070443 7575.1.1.4 ↗ a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C11 0.56 41.0 2.71e-01 79.0% 19.4%
5061741 7575.1.1.4 ↗ a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C11 0.55 41.0 2.70e-01 81.5% 19.2%
3236050 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.53 40.0 3.67e-01 82.7% 69.1%
3972951 1.1.7.88 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 0.52 35.0 3.64e-01 79.0% 73.3%
3926830 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.51 39.0 3.55e-01 82.7% 64.5%
3617912 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.51 39.0 3.46e-01 84.0% 71.7%