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PHAGE-A6--js4906-27-3_S30_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00019
Bact-VirPHAGE-A6--js4906-27-3_S30_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00019
Identity
- Kingdom:
- phage
Quality
84.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-98
Domain cluster:
rep: aot2015-NO19_SRR1761693_USA_trim_clean_trim_clean_scaffold_5_curated_closed_complete_reversed_prodigal-single.1__X__X__00049__D195-288
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13306.13 best | LRR_5 | 49.4 | 5.90e-13 | 100.0% | 64.6% |
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4cp6A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.90 | 86.0 | 5.30e-01 | 100.0% | 22.0% |
| 4ojuA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.89 | 84.0 | 6.83e-01 | 100.0% | 59.2% |
| 4h09D00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.88 | 82.0 | 5.18e-01 | 100.0% | 23.1% |
| 4gt6A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.88 | 83.0 | 5.18e-01 | 100.0% | 22.4% |
| 4fs7A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.87 | 82.0 | 5.14e-01 | 100.0% | 22.5% |
| 3sb4A01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.82 | 76.0 | 5.85e-01 | 100.0% | 66.5% |
| 1oznA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.82 | 75.0 | 5.08e-01 | 100.0% | 31.3% |
| 5z8xA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.81 | 73.0 | 4.83e-01 | 100.0% | 27.1% |
| 2xwtC00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.80 | 74.0 | 5.26e-01 | 100.0% | 37.6% |
| 4u7lA01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.80 | 73.0 | 4.83e-01 | 100.0% | 27.6% |
| 2o6qA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.80 | 73.0 | 5.01e-01 | 100.0% | 33.0% |
| 4r6gA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.80 | 73.0 | 4.49e-01 | 100.0% | 19.0% |
| 2wfhA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.80 | 73.0 | 5.61e-01 | 100.0% | 49.2% |
| 4rcaB00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.79 | 73.0 | 5.14e-01 | 100.0% | 36.5% |
| 2id5A01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.79 | 72.0 | 4.63e-01 | 100.0% | 24.2% |
| 4v2dA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.78 | 71.0 | 4.72e-01 | 100.0% | 28.2% |
| 4cnmA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.78 | 71.0 | 4.85e-01 | 100.0% | 32.5% |
| 2r9uA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.77 | 71.0 | 5.49e-01 | 100.0% | 50.0% |
| 1xkuA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.76 | 70.0 | 4.67e-01 | 100.0% | 28.2% |
| 1gwbA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.76 | 69.0 | 4.81e-01 | 100.0% | 33.2% |
| 4xsqB00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.76 | 70.0 | 5.37e-01 | 100.0% | 52.5% |
| 2z66A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.75 | 69.0 | 4.62e-01 | 100.0% | 29.1% |
| 2z7xA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.74 | 67.0 | 4.06e-01 | 100.0% | 17.5% |
| 5hzlB01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.74 | 67.0 | 5.10e-01 | 100.0% | 45.8% |
| 2wqxA01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.73 | 66.0 | 4.92e-01 | 100.0% | 48.6% |
| 4b8cJ01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.73 | 66.0 | 4.98e-01 | 100.0% | 42.7% |
| 1o6vB01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.73 | 66.0 | 4.24e-01 | 100.0% | 27.2% |
| 1wwlB00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.73 | 65.0 | 4.40e-01 | 100.0% | 32.4% |
| 4ezgA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.73 | 65.0 | 5.04e-01 | 100.0% | 47.6% |
| 2z7xB00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.72 | 65.0 | 3.98e-01 | 100.0% | 17.5% |
| 4wp6A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.67 | 60.0 | 4.97e-01 | 100.0% | 73.5% |
| 2lz0A00 | 3.40.50.12480 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 52.0 | 4.98e-01 | 96.4% | 74.0% |
| 5gudA03 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 48.0 | 3.92e-01 | 85.7% | 82.8% |
| 1sc6A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 48.0 | 4.21e-01 | 86.9% | 70.7% |
| 2eklA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 47.0 | 4.21e-01 | 86.9% | 76.0% |
| 3lrtA02 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 42.0 | 3.66e-01 | 85.7% | 80.3% |
| 6xgzB01 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.53 | 43.0 | 4.26e-01 | 90.5% | 100.0% |
| 5fclE01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.50 | 38.0 | 3.75e-01 | 82.1% | 88.9% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3229964 | 207.1.1.139 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_6, LRR_8 | 0.85 | 79.0 | 4.80e-01 | 100.0% | 18.7% |
| 3622173 | 207.1.1.139 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_6, LRR_8 | 0.84 | 77.0 | 5.45e-01 | 100.0% | 37.1% |
| 4620512 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.82 | 75.0 | 4.53e-01 | 100.0% | 17.7% |
| 3412767 | 207.1.1.24 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 | 0.82 | 75.0 | 5.04e-01 | 100.0% | 29.7% |
| 4851734 | 2004.1.1.565 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › LRR_1, LRR_8 | 0.81 | 74.0 | 5.87e-01 | 100.0% | 53.6% |
| 4003544 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.81 | 74.0 | 4.11e-01 | 100.0% | 8.3% |
| None | — | 0.81 | 74.0 | 4.29e-01 | 100.0% | 12.6% | |
| 4002883 | 207.1.1.139 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_6, LRR_8 | 0.81 | 74.0 | 4.64e-01 | 100.0% | 21.2% |
| 3914478 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.81 | 74.0 | 5.14e-01 | 100.0% | 34.2% |
| 3243356 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.81 | 74.0 | 4.60e-01 | 100.0% | 20.1% |
| 3869777 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.81 | 75.0 | 4.55e-01 | 100.0% | 18.8% |
| 3869660 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.80 | 74.0 | 4.46e-01 | 100.0% | 17.6% |
| 142604 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.80 | 74.0 | 5.26e-01 | 100.0% | 37.6% |
| 3915421 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.80 | 74.0 | 5.55e-01 | 100.0% | 45.8% |
| 2629288 | 207.1.1.139 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_6, LRR_8 | 0.80 | 73.0 | 5.27e-01 | 100.0% | 39.9% |
| 2832657 | 207.1.1.102 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1+LRR_8+LRR_14 | 0.80 | 72.0 | 5.25e-01 | 100.0% | 39.9% |
| 2056444 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.79 | 72.0 | 4.48e-01 | 100.0% | 24.0% |
| 4201683 | 207.1.1.140 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRRNT, LRR_8 | 0.78 | 71.0 | 4.62e-01 | 100.0% | 26.0% |
| 366143 | 207.1.1.140 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRRNT, LRR_8 | 0.77 | 71.0 | 5.54e-01 | 100.0% | 51.5% |
| 3918672 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.76 | 68.0 | 4.73e-01 | 100.0% | 35.6% |
| 3682093 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.76 | 67.0 | 5.40e-01 | 100.0% | 51.2% |
| 1030871 | 207.1.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_4 | 0.75 | 66.0 | 5.10e-01 | 100.0% | 44.3% |
| 3755434 | 207.1.1.208 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_8, LRR_9 | 0.74 | 67.0 | 3.85e-01 | 100.0% | 10.9% |
| 3893295 | 207.1.1.137 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_8 | 0.74 | 67.0 | 4.98e-01 | 100.0% | 40.0% |
| 4413839 | 207.1.1.187 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_4, LRR_8, LRR_9 | 0.74 | 67.0 | 3.81e-01 | 100.0% | 10.5% |
| 1338388 | 207.1.1.206 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_6, LRR_8, LRR_9 | 0.73 | 66.0 | 5.08e-01 | 100.0% | 44.9% |
| 4308367 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.73 | 66.0 | 4.22e-01 | 100.0% | 26.5% |
| 1607411 | 207.1.1.137 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_8 | 0.73 | 64.0 | 4.41e-01 | 100.0% | 27.9% |
| 4625182 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.73 | 66.0 | 4.80e-01 | 100.0% | 45.3% |
| 3319128 | 207.1.1.131 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRRNT_2, LRR_8, LRR_14 | 0.73 | 65.0 | 4.66e-01 | 100.0% | 35.1% |
| 3339832 | 207.1.1.132 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_6, LRR_8 | 0.72 | 65.0 | 3.89e-01 | 100.0% | 14.5% |
| 4863578 | 207.1.1.185 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_6 | 0.72 | 64.0 | 5.07e-01 | 100.0% | 48.0% |
| 3605326 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.72 | 65.0 | 4.92e-01 | 100.0% | 42.0% |
| 5029830 | 207.1.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_4 | 0.72 | 64.0 | 5.16e-01 | 100.0% | 50.9% |
| 3780345 | 101.1.17.32 ↗ | alpha arrays › HTH › HTH › FF domain › LRR_LRWD1 | 0.71 | 63.0 | 4.86e-01 | 100.0% | 47.4% |
| 3931568 | 207.1.1.156 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF27094 | 0.68 | 61.0 | 3.79e-01 | 100.0% | 32.0% |
| 3936229 | 207.1.1.156 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF27094 | 0.67 | 60.0 | 3.88e-01 | 100.0% | 22.4% |
| 3924167 | 207.1.1.156 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF27094 | 0.64 | 58.0 | 3.57e-01 | 100.0% | 17.2% |