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PHAGE-A6--js4906-27-3_S30_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00269
Bact-VirPHAGE-A6--js4906-27-3_S30_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00269
Identity
- Kingdom:
- phage
Quality
89.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-57_143-153
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5cbeE00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.74 | 43.0 | 4.34e-01 | 72.3% | 57.8% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 40.0 | 3.97e-01 | 86.2% | 52.9% |
| 1icwB00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.70 | 46.0 | 4.65e-01 | 84.6% | 66.7% |
| 4hcsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.70 | 45.0 | 4.53e-01 | 86.2% | 64.2% |
| 1eotA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.68 | 41.0 | 3.93e-01 | 78.5% | 51.4% |
| 1wcdJ01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 52.0 | 3.40e-01 | 83.1% | 96.4% |
| 3d6wB02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.67 | 36.0 | 4.53e-01 | 75.4% | 89.7% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 41.0 | 4.26e-01 | 87.7% | 66.1% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 39.0 | 4.05e-01 | 83.1% | 61.3% |
| 1nr4C00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.65 | 42.0 | 4.20e-01 | 84.6% | 63.6% |
| 1f9qD00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.65 | 43.0 | 4.29e-01 | 86.2% | 66.7% |
| 1zxtA01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 39.0 | 4.02e-01 | 84.6% | 68.9% |
| 1eigA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 38.0 | 3.67e-01 | 84.6% | 57.5% |
| 1eqtA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 37.0 | 3.71e-01 | 86.2% | 62.7% |
| 2ky8A00 | 3.30.890.10 | Alpha Beta › 2-Layer Sandwich › Methyl-cpg-binding Protein 2; Chain A › Methyl-cpg-binding Protein 2; Chain A | 0.57 | 38.0 | 3.74e-01 | 92.3% | 64.3% |
| 2re3A02 | 2.30.270.10 | Mainly Beta › Roll › duf1285 protein fold › duf1285 protein | 0.55 | 43.0 | 4.26e-01 | 96.9% | 78.6% |
| 7prrB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 42.0 | 3.21e-01 | 87.7% | 50.9% |
| 1s3aA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 44.0 | 4.10e-01 | 93.8% | 98.8% |
| 4hwxA00 | 3.30.350.10 | Alpha Beta › 2-Layer Sandwich › Subtilisin Inhibitor › Subtilisin inhibitor-like | 0.53 | 43.0 | 3.59e-01 | 89.2% | 90.4% |
| 2x5cA01 | 3.30.70.3590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 31.0 | 2.84e-01 | 83.1% | 40.7% |
| 2k4nA00 | 3.30.720.70 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.51 | 39.0 | 3.35e-01 | 86.2% | 61.3% |
| 1rvjH02 | 3.90.50.10 | Alpha Beta › Alpha-Beta Complex › Photosynthetic Reaction Center; Chain H, domain 2 › Photosynthetic Reaction Center, subunit H, domain 2 | 0.50 | 44.0 | 3.53e-01 | 100.0% | 62.9% |
| 3ml4C01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 36.0 | 3.07e-01 | 98.5% | 45.4% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3814728 | 376.1.2.16 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1-like_CT | 0.78 | 56.0 | 5.81e-01 | 92.3% | 81.7% |
| 3947959 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.75 | 61.0 | 5.24e-01 | 87.7% | 59.0% |
| 3540261 | 376.1.2.28 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › zf-FCS | 0.75 | 56.0 | 5.99e-01 | 89.2% | 94.5% |
| 4963349 | 101.1.2.912 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF5830 | 0.74 | 52.0 | 4.28e-01 | 75.4% | 41.7% |
| 3815263 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.73 | 49.0 | 5.78e-01 | 76.9% | 100.0% |
| 4683204 | 101.35.1.5 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 | 0.73 | 52.0 | 4.41e-01 | 100.0% | 46.7% |
| 4989895 | 304.48.1.28 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Csm1_B | 0.73 | 56.0 | 3.36e-01 | 81.5% | 56.4% |
| 3826537 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.72 | 55.0 | 5.94e-01 | 81.5% | 98.2% |
| 3822096 | 376.1.2.16 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1-like_CT | 0.71 | 50.0 | 5.33e-01 | 89.2% | 87.3% |
| 3802006 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.70 | 51.0 | 5.30e-01 | 76.9% | 83.3% |
| 3716804 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.69 | 54.0 | 4.96e-01 | 92.3% | 64.7% |
| 3519254 | 6171.1.1.0 ↗ | alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases | 0.68 | 46.0 | 3.33e-01 | 70.8% | 55.0% |
| 3189999 | 376.1.2.44 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › Vfa1 | 0.68 | 49.0 | 5.37e-01 | 86.2% | 100.0% |
| 3604881 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.68 | 50.0 | 5.22e-01 | 78.5% | 86.4% |
| 3782681 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.67 | 54.0 | 4.56e-01 | 95.4% | 52.7% |
| 3803725 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.66 | 44.0 | 4.88e-01 | 70.8% | 90.0% |
| 3833660 | 377.1.1.47 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › C1-like_CT | 0.66 | 51.0 | 5.20e-01 | 90.8% | 87.7% |
| None | — | 0.66 | 46.0 | 3.36e-01 | 72.3% | 58.8% | |
| 4019898 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.65 | 55.0 | 4.77e-01 | 93.8% | 67.0% |
| 3616769 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.63 | 36.0 | 3.18e-01 | 75.4% | 37.9% |
| 4000496 | 6171.1.1.0 ↗ | alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases | 0.63 | 46.0 | 3.23e-01 | 80.0% | 25.0% |
| 3556735 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.62 | 40.0 | 3.87e-01 | 86.2% | 58.9% |
| 5054192 | 802.1.1.0 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 | 0.62 | 42.0 | 3.69e-01 | 72.3% | 62.0% |
| 3808141 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.61 | 55.0 | 4.60e-01 | 100.0% | 83.6% |
| 3933919 | 220.1.1.176 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7778 | 0.60 | 43.0 | 3.44e-01 | 89.2% | 37.0% |
| 5023580 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 37.0 | 3.79e-01 | 80.0% | 64.6% |
| 3942738 | 295.1.1.29 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › YjeJ | 0.59 | 53.0 | 3.97e-01 | 100.0% | 75.5% |
| 3887044 | 4292.2.1.2 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain › KIF1B | 0.59 | 49.0 | 3.95e-01 | 93.8% | 63.8% |
| 4936198 | 2008.1.1.78 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_endonuc | 0.56 | 46.0 | 3.80e-01 | 93.8% | 74.8% |
| 2855513 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.55 | 45.0 | 2.98e-01 | 96.9% | 29.1% |
| 1681454 | 304.166.1.9 ↗ | a+b two layers › Alpha-beta plaits › Nup54 ferredoxin-like domain › Nup54 ferredoxin-like domain › PF29949 | 0.54 | 36.0 | 2.97e-01 | 73.8% | 38.8% |
| 3349068 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.54 | 44.0 | 4.09e-01 | 95.4% | 70.5% |
| 3235619 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.53 | 44.0 | 2.85e-01 | 92.3% | 25.9% |
| 154302 | 841.1.1.1 ↗ | a+b two layers › Subtilisin inhibitor › Subtilisin inhibitor › Subtilisin inhibitor › SSI | 0.53 | 43.0 | 3.59e-01 | 89.2% | 90.4% |
| 3383138 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 42.0 | 3.93e-01 | 90.8% | 71.8% |
| 5062120 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 40.0 | 3.42e-01 | 86.2% | 51.4% |
| 3716892 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.52 | 40.0 | 3.40e-01 | 89.2% | 48.8% |
| 2855566 | 223.1.1.51 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 | 0.52 | 42.0 | 3.20e-01 | 96.9% | 46.1% |
| None | — | 0.52 | 42.0 | 2.67e-01 | 87.7% | 33.3% | |
| 4961432 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.51 | 44.0 | 3.90e-01 | 95.4% | 75.8% |
| 184717 | 4272.2.1.1 ↗ | a+b two layers › Nqo5-like › Protein PF0246 › Protein PF0246 › DUF5748 | 0.51 | 39.0 | 3.35e-01 | 86.2% | 61.3% |
| 3316909 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.51 | 36.0 | 2.91e-01 | 86.2% | 35.7% |
D2
high
residues 59-137
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gczA03 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.83 | 51.0 | 5.57e-01 | 100.0% | 75.4% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.82 | 57.0 | 6.00e-01 | 100.0% | 78.1% |
| 3r84B00 | 6.10.280.160 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 | 0.80 | 59.0 | 5.90e-01 | 100.0% | 75.0% |
| 3m9vA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.76 | 55.0 | 4.31e-01 | 100.0% | 38.2% |
| 8a0rA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.75 | 47.0 | 3.95e-01 | 100.0% | 38.5% |
| 4q5qA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.71 | 45.0 | 4.14e-01 | 100.0% | 48.6% |
| 3rq9A00 | 1.10.287.2500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.71 | 43.0 | 4.40e-01 | 98.7% | 61.5% |
| 2p5tA00 | 1.10.8.130 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.71 | 51.0 | 4.88e-01 | 100.0% | 65.2% |
| 4lwsA00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.70 | 54.0 | 4.94e-01 | 100.0% | 64.0% |
| 3onjA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.70 | 50.0 | 4.70e-01 | 100.0% | 61.9% |
| 2odmA00 | 1.10.287.750 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › SO2669-like | 0.68 | 43.0 | 4.30e-01 | 100.0% | 63.3% |
| 4iloA00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 58.0 | 3.97e-01 | 100.0% | 30.1% |
| 1br2A03 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.68 | 61.0 | 5.72e-01 | 100.0% | 92.6% |
| 4lqxA00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.68 | 51.0 | 3.38e-01 | 98.7% | 20.8% |
| 2qywA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.67 | 51.0 | 4.83e-01 | 100.0% | 67.4% |
| 1i5nB00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.67 | 61.0 | 5.25e-01 | 100.0% | 79.0% |
| 3dcfA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.67 | 45.0 | 3.66e-01 | 100.0% | 38.7% |
| 5nl6B01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 53.0 | 4.55e-01 | 100.0% | 56.2% |
| 4errB00 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 42.0 | 4.15e-01 | 100.0% | 62.7% |
| 1fioA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 54.0 | 3.96e-01 | 100.0% | 37.9% |
| 3ofnY00 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.61 | 57.0 | 4.96e-01 | 100.0% | 72.2% |
| 3go9A02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.60 | 46.0 | 3.40e-01 | 97.5% | 30.9% |
| 1iurA01 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.60 | 34.0 | 3.76e-01 | 100.0% | 69.8% |
| 1r3dA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.59 | 50.0 | 3.52e-01 | 94.9% | 28.8% |
| 1foeA01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.58 | 53.0 | 3.88e-01 | 100.0% | 84.0% |
| 3edvB01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 49.0 | 4.09e-01 | 100.0% | 54.4% |
| 3h1nA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.56 | 47.0 | 4.12e-01 | 97.5% | 61.7% |
| 1e6dM01 | 1.20.85.10 | Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like | 0.55 | 50.0 | 4.09e-01 | 100.0% | 77.6% |
| 4iggB02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.55 | 48.0 | 4.20e-01 | 97.5% | 90.9% |
| 2uyyA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.55 | 47.0 | 4.06e-01 | 100.0% | 61.0% |
| 3lbxB01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 43.0 | 3.95e-01 | 100.0% | 66.4% |
| 2o36A01 | 1.20.1050.40 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › Endopeptidase. Chain P; domain 1 | 0.53 | 42.0 | 3.57e-01 | 83.5% | 96.9% |
| 2q00B00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.53 | 43.0 | 3.81e-01 | 91.1% | 98.4% |
| 1su0B00 | 3.90.1010.10 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.52 | 42.0 | 3.63e-01 | 93.7% | 67.6% |
| 4adnA01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.51 | 45.0 | 4.42e-01 | 97.5% | 92.9% |
| 2g7sA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.50 | 41.0 | 3.20e-01 | 93.7% | 43.2% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3577937 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.82 | 53.0 | 4.64e-01 | 100.0% | 45.2% |
| 3180119 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.82 | 49.0 | 4.84e-01 | 98.7% | 56.5% |
| 3563679 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.81 | 56.0 | 5.01e-01 | 100.0% | 53.3% |
| 3216584 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.80 | 52.0 | 4.91e-01 | 97.5% | 55.8% |
| 3744696 | 603.1.1.2 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Not3 | 0.78 | 49.0 | 4.45e-01 | 100.0% | 47.6% |
| 3257188 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.78 | 47.0 | 3.97e-01 | 97.5% | 36.9% |
| 4030113 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.76 | 44.0 | 4.10e-01 | 100.0% | 47.4% |
| 3323862 | 611.9.1.4 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N | 0.74 | 38.0 | 3.82e-01 | 100.0% | 47.5% |
| 3189696 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.74 | 45.0 | 3.96e-01 | 98.7% | 41.7% |
| 3585432 | 604.1.1.98 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_Anc-1 | 0.72 | 53.0 | 4.63e-01 | 100.0% | 53.0% |
| 5053994 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.71 | 42.0 | 4.30e-01 | 98.7% | 61.3% |
| 3429164 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.69 | 41.0 | 3.88e-01 | 96.2% | 48.4% |
| 3601623 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.69 | 44.0 | 4.20e-01 | 94.9% | 56.7% |
| 3570651 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.68 | 46.0 | 4.40e-01 | 100.0% | 58.9% |
| 5059963 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.68 | 45.0 | 3.70e-01 | 100.0% | 37.2% |
| 5011995 | 601.3.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain | 0.67 | 60.0 | 5.57e-01 | 100.0% | 93.0% |
| 3317539 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.67 | 52.0 | 4.59e-01 | 98.7% | 56.5% |
| 4030263 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.65 | 43.0 | 3.47e-01 | 100.0% | 35.3% |
| 4025757 | 603.1.1.6 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin_2 | 0.63 | 54.0 | 3.81e-01 | 100.0% | 32.7% |
| 4947640 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.63 | 54.0 | 3.70e-01 | 98.7% | 28.6% |
| 3349325 | 5086.1.1.135 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF7615 | 0.62 | 49.0 | 4.88e-01 | 93.7% | 81.2% |
| 3927006 | 603.1.1.99 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27021 | 0.62 | 41.0 | 3.92e-01 | 94.9% | 58.9% |
| 3918098 | 604.6.1.57 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › Not3 | 0.62 | 46.0 | 4.20e-01 | 98.7% | 59.0% |
| 3186617 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.61 | 49.0 | 3.18e-01 | 93.7% | 20.7% |
| 5054107 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.61 | 54.0 | 3.71e-01 | 100.0% | 30.6% |
| 3576882 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.60 | 44.0 | 3.89e-01 | 100.0% | 51.7% |
| 4943642 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.59 | 53.0 | 4.55e-01 | 100.0% | 63.3% |
| 4937093 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.59 | 54.0 | 4.67e-01 | 100.0% | 91.7% |
| 3483996 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.58 | 47.0 | 4.24e-01 | 100.0% | 63.6% |
| 3414399 | 5086.1.1.106 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF725 | 0.56 | 51.0 | 3.97e-01 | 100.0% | 66.5% |
| 3466449 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.56 | 47.0 | 4.45e-01 | 100.0% | 76.8% |
| 4001770 | 4044.1.1.12 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › RH_dom | 0.56 | 39.0 | 3.73e-01 | 97.5% | 61.1% |
| 3723178 | 192.8.1.35 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › DUF6594 | 0.56 | 50.0 | 4.84e-01 | 100.0% | 87.8% |
| 3840064 | 192.24.1.0 ↗ | alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain | 0.54 | 49.0 | 4.61e-01 | 100.0% | 94.7% |
| 3631218 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.54 | 49.0 | 4.60e-01 | 100.0% | 82.1% |
| 3245538 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.52 | 41.0 | 3.77e-01 | 92.4% | 64.8% |
| 3224585 | 603.1.1.99 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27021 | 0.52 | 42.0 | 3.80e-01 | 94.9% | 64.5% |
| 4928052 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.51 | 44.0 | 2.91e-01 | 96.2% | 24.6% |