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PHAGE-A6--js4906-27-3_S30_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00291
Bact-VirPHAGE-A6--js4906-27-3_S30_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00291
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-63
Domain cluster:
rep: KU708004.1__AMW64531.1__AH14a_p71__00071__D8-63
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1twfI01 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.66 | 51.0 | 5.37e-01 | 92.5% | 100.0% |
| 8aimG01 | 3.10.450.20 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor | 0.61 | 44.0 | 3.93e-01 | 81.1% | 79.0% |
| 2rajA02 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.60 | 41.0 | 3.22e-01 | 73.6% | 69.0% |
| 2xzm901 | 6.20.50.180 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.58 | 44.0 | 3.98e-01 | 83.0% | 69.4% |
| 2ckkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 44.0 | 4.43e-01 | 86.8% | 92.5% |
| 2e5kA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 42.0 | 4.04e-01 | 86.8% | 87.5% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 43.0 | 3.97e-01 | 88.7% | 79.2% |
| 1ybyA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 43.0 | 4.07e-01 | 86.8% | 93.8% |
| 1h3zA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 44.0 | 3.57e-01 | 92.5% | 63.9% |
| 1a31A02 | 2.170.11.10 | Mainly Beta › Beta Complex › DNA Topoisomerase I; domain 2 › DNA Topoisomerase I, domain 2 | 0.54 | 40.0 | 3.28e-01 | 83.0% | 92.8% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 40.0 | 4.21e-01 | 83.0% | 93.6% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 41.0 | 3.79e-01 | 88.7% | 93.3% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 42.0 | 4.00e-01 | 88.7% | 96.8% |
| 3ntkA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 40.0 | 3.63e-01 | 90.6% | 71.2% |
| 2bujB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 41.0 | 3.46e-01 | 90.6% | 80.9% |
| 5f3yA05 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 38.0 | 3.49e-01 | 86.8% | 77.9% |
| 1k32A01 | 2.120.10.60 | Mainly Beta › 6 Propeller › Neuraminidase › Tricorn protease N-terminal domain | 0.50 | 39.0 | 2.58e-01 | 92.5% | 48.2% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5023784 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 50.0 | 4.81e-01 | 75.5% | 65.0% |
| 4962087 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 48.0 | 4.65e-01 | 75.5% | 73.3% |
| 4520505 | 375.1.1.9 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4_Topoisom | 0.65 | 46.0 | 4.94e-01 | 75.5% | 97.8% |
| 3208203 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.64 | 50.0 | 5.04e-01 | 94.3% | 85.5% |
| 3593754 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 43.0 | 4.58e-01 | 73.6% | 91.1% |
| 5048038 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 49.0 | 4.75e-01 | 90.6% | 81.7% |
| 5028870 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.61 | 44.0 | 4.12e-01 | 81.1% | 90.0% |
| 3894798 | 4.1.1.243 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa | 0.60 | 45.0 | 4.79e-01 | 81.1% | 100.0% |
| 4044015 | 3364.1.1.2 ↗ | few secondary structure elements › Epidermal patterning factor-like protein 9 › Epidermal patterning factor-like protein 9 › Epidermal patterning factor-like protein 9 › EPF | 0.60 | 42.0 | 4.31e-01 | 73.6% | 93.9% |
| 3249012 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 45.0 | 3.95e-01 | 88.7% | 52.9% |
| 3189012 | 387.1.1.10 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related › zf-GRF | 0.59 | 43.0 | 4.36e-01 | 84.9% | 98.2% |
| 3309658 | 5.1.4.44 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1_2 | 0.58 | 46.0 | 2.90e-01 | 92.5% | 37.6% |
| 3363865 | 387.1.1.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related | 0.58 | 41.0 | 4.21e-01 | 79.2% | 100.0% |
| 4436471 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.58 | 42.0 | 3.40e-01 | 77.4% | 78.1% |
| 3570230 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.58 | 43.0 | 3.76e-01 | 86.8% | 66.7% |
| 3842631 | 4.1.1.243 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa | 0.57 | 44.0 | 4.09e-01 | 86.8% | 71.4% |
| 3519115 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.57 | 46.0 | 2.83e-01 | 90.6% | 24.3% |
| 3250764 | 2.1.1.137 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF6748 | 0.57 | 46.0 | 3.79e-01 | 96.2% | 49.0% |
| 3523802 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 43.0 | 4.19e-01 | 86.8% | 83.3% |
| 3585214 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 40.0 | 3.29e-01 | 88.7% | 42.0% |
| 5051313 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 41.0 | 3.93e-01 | 86.8% | 78.5% |
| 3589823 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.54 | 38.0 | 3.63e-01 | 75.5% | 78.5% |
| 3646319 | 6.1.1.25 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › DUF569 | 0.54 | 45.0 | 3.25e-01 | 100.0% | 85.1% |
| 4016159 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.54 | 44.0 | 2.71e-01 | 94.3% | 28.8% |
| 5071787 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.54 | 42.0 | 3.22e-01 | 86.8% | 42.3% |
| 461497 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 43.0 | 3.12e-01 | 90.6% | 48.4% |
| 4338527 | 5.1.5.145 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › eIF2A | 0.53 | 42.0 | 2.49e-01 | 92.5% | 24.6% |
| 4978946 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 41.0 | 3.97e-01 | 84.9% | 95.0% |
| 3202614 | 4.1.1.146 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_uL24m-like | 0.53 | 38.0 | 2.43e-01 | 81.1% | 17.4% |
| 4187163 | 2.4.1.12 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal | 0.53 | 42.0 | 3.32e-01 | 88.7% | 50.4% |
| 3623819 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 41.0 | 2.60e-01 | 88.7% | 24.9% |
| 3758536 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 40.0 | 3.73e-01 | 86.8% | 75.7% |
| 3716128 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.52 | 42.0 | 2.66e-01 | 90.6% | 27.6% |
| 3747392 | 4.1.1.31 ↗ | beta barrels › SH3 › SH3 › SH3 › Spin-Ssty | 0.52 | 39.0 | 3.76e-01 | 84.9% | 69.2% |
| 5056707 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 40.0 | 3.95e-01 | 83.0% | 94.5% |
| 4003553 | 206.1.1.71 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Kdo | 0.52 | 43.0 | 2.56e-01 | 94.3% | 90.3% |
| 3421912 | 6.1.1.25 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › DUF569 | 0.52 | 40.0 | 2.98e-01 | 98.1% | 30.6% |
| 3858433 | 206.1.1.72 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Pkinase_fungal | 0.51 | 41.0 | 2.60e-01 | 90.6% | 27.9% |
| 1824182 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.51 | 38.0 | 3.49e-01 | 86.8% | 77.9% |
| 3374847 | 5.1.3.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Str_synth | 0.51 | 39.0 | 2.54e-01 | 94.3% | 92.5% |
| 3787821 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.50 | 39.0 | 3.24e-01 | 88.7% | 44.8% |