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PHAGE-A6--js4906-27-3_S30_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00309
Bact-VirPHAGE-A6--js4906-27-3_S30_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00309
Identity
- Kingdom:
- phage
Quality
85.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 95-107_147-227
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 46.0 | 5.16e-01 | 74.5% | 84.7% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 37.0 | 4.30e-01 | 75.5% | 72.1% |
| 1mhnA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 38.0 | 4.67e-01 | 76.6% | 88.1% |
| 4ld6A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 42.0 | 3.91e-01 | 79.8% | 54.7% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 36.0 | 4.15e-01 | 75.5% | 79.7% |
| 2rs7A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.58 | 31.0 | 3.47e-01 | 93.6% | 66.2% |
| 2l89A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 38.0 | 3.62e-01 | 76.6% | 57.4% |
| 2db9A01 | 3.90.70.200 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Plus-3 domain | 0.58 | 38.0 | 3.41e-01 | 76.6% | 47.4% |
| 3htnB00 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.56 | 38.0 | 3.34e-01 | 74.5% | 46.8% |
| 5jv4A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 38.0 | 3.38e-01 | 72.3% | 88.0% |
| 2l1tA00 | 2.30.110.70 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.51 | 34.0 | 3.27e-01 | 81.9% | 58.7% |
| 3k6yA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.50 | 28.0 | 2.84e-01 | 78.7% | 53.3% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2157301 | 4.1.1.78 ↗ | beta barrels › SH3 › SH3 › SH3 › TTD | 0.71 | 45.0 | 5.04e-01 | 75.5% | 82.2% |
| 4470603 | 4.1.1.217 ↗ | beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 | 0.65 | 48.0 | 3.97e-01 | 76.6% | 52.1% |
| 3650798 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 48.0 | 4.47e-01 | 76.6% | 67.8% |
| 3557649 | 4.8.1.20 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PWP3A-B_N | 0.65 | 43.0 | 4.13e-01 | 79.8% | 60.0% |
| 3833618 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.64 | 47.0 | 4.06e-01 | 77.7% | 84.1% |
| 3177469 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 40.0 | 4.46e-01 | 75.5% | 84.3% |
| 3341337 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.61 | 45.0 | 3.67e-01 | 76.6% | 85.3% |
| 3423907 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.61 | 45.0 | 3.68e-01 | 76.6% | 81.8% |
| 3464303 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.61 | 44.0 | 3.75e-01 | 76.6% | 84.5% |
| 3465486 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.60 | 45.0 | 3.61e-01 | 77.7% | 83.4% |
| 3342228 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.60 | 44.0 | 3.60e-01 | 76.6% | 81.8% |
| 3482706 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 43.0 | 3.49e-01 | 75.5% | 50.6% |
| 3662009 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.59 | 43.0 | 3.80e-01 | 76.6% | 82.9% |
| 3495713 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 43.0 | 3.31e-01 | 75.5% | 44.5% |
| 3926921 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.59 | 34.0 | 2.74e-01 | 76.6% | 31.0% |
| 3231798 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.58 | 29.0 | 2.92e-01 | 81.9% | 46.3% |
| 3447797 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.58 | 44.0 | 3.75e-01 | 79.8% | 81.3% |
| 3383638 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.58 | 44.0 | 3.75e-01 | 79.8% | 80.7% |
| 3384627 | 4.1.1.386 ↗ | beta barrels › SH3 › SH3 › SH3 › PF28657 | 0.58 | 42.0 | 3.67e-01 | 75.5% | 60.7% |
| 3258054 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 44.0 | 3.76e-01 | 79.8% | 96.6% |
| 3439789 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.58 | 41.0 | 3.35e-01 | 74.5% | 50.9% |
| 3253267 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 36.0 | 3.77e-01 | 75.5% | 72.9% |
| 3727542 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 32.0 | 3.29e-01 | 74.5% | 58.9% |
| 3981111 | 1.1.7.89 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 | 0.55 | 38.0 | 3.26e-01 | 74.5% | 44.5% |
| 5048974 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 35.0 | 3.35e-01 | 75.5% | 55.5% |
| 3612182 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 38.0 | 3.88e-01 | 74.5% | 94.4% |
| 3997130 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 38.0 | 3.81e-01 | 76.6% | 82.0% |
| 4372074 | 1.1.7.89 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 | 0.53 | 37.0 | 3.29e-01 | 74.5% | 50.0% |
| 4273561 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.53 | 35.0 | 3.12e-01 | 74.5% | 47.4% |
| 3816110 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.53 | 36.0 | 2.79e-01 | 71.3% | 84.0% |
| 3707345 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 38.0 | 3.91e-01 | 75.5% | 94.4% |
| 3988859 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.51 | 34.0 | 3.32e-01 | 74.5% | 61.0% |
| 3591243 | 3698.1.1.1 ↗ | beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › PRMT5_C | 0.51 | 35.0 | 2.67e-01 | 70.2% | 53.5% |
| 3823190 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.51 | 34.0 | 2.88e-01 | 81.9% | 40.0% |
| 4029647 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 25.0 | 3.09e-01 | 77.7% | 82.0% |
D2
medium
residues 12-88
Domain cluster:
representative