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PHAGE-A6--js4906-27-3_S30_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00332
Bact-VirPHAGE-A6--js4906-27-3_S30_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00332
Identity
- Kingdom:
- phage
Quality
77.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-88
Domain cluster:
rep: js4906-25-2-S21_Prophage_curated_prodigal-single.1__X__X__00144__D148-258
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13306.13 best | LRR_5 | 44.9 | 1.50e-11 | 92.0% | 55.1% |
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fs7A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.87 | 79.0 | 5.01e-01 | 96.6% | 27.2% |
| 4gt6A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.83 | 77.0 | 4.93e-01 | 100.0% | 32.7% |
| 4h09D00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.82 | 76.0 | 4.87e-01 | 100.0% | 32.1% |
| 4ojuA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.81 | 77.0 | 6.39e-01 | 100.0% | 78.9% |
| 3sb4A02 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.81 | 76.0 | 6.17e-01 | 100.0% | 66.7% |
| 3sb4A01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.79 | 74.0 | 5.71e-01 | 98.9% | 69.3% |
| 2wfhA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.78 | 71.0 | 5.56e-01 | 100.0% | 66.3% |
| 5z8xA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.77 | 71.0 | 4.70e-01 | 100.0% | 38.4% |
| 1w8aA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.76 | 69.0 | 5.31e-01 | 100.0% | 62.4% |
| 4u08A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.74 | 67.0 | 4.32e-01 | 100.0% | 31.2% |
| 4bsrB01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.74 | 67.0 | 4.20e-01 | 100.0% | 27.8% |
| 4tzhA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.73 | 66.0 | 5.11e-01 | 100.0% | 65.8% |
| 1gwbA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.73 | 66.0 | 4.65e-01 | 100.0% | 46.8% |
| 4b8cJ01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.72 | 65.0 | 4.95e-01 | 100.0% | 44.7% |
| 2wqxA01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.71 | 64.0 | 4.81e-01 | 100.0% | 55.7% |
| 7ax1A01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.70 | 63.0 | 5.39e-01 | 100.0% | 62.7% |
| 1ogqA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.70 | 63.0 | 4.30e-01 | 100.0% | 40.6% |
| 4fcgA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.70 | 63.0 | 4.36e-01 | 100.0% | 42.2% |
| 1xeuA01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.69 | 62.0 | 4.91e-01 | 100.0% | 63.9% |
| 2lz0A00 | 3.40.50.12480 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 55.0 | 5.32e-01 | 100.0% | 88.0% |
| 1d1tA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 47.0 | 4.08e-01 | 87.5% | 89.9% |
| 1y65A00 | 3.20.20.300 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase, family 3, N-terminal domain | 0.57 | 46.0 | 3.18e-01 | 90.9% | 53.9% |
| 4bucA03 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.54 | 42.0 | 3.75e-01 | 85.2% | 60.9% |
| 3i42A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 42.0 | 3.87e-01 | 86.4% | 83.1% |
| 4qdiA03 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.52 | 40.0 | 3.52e-01 | 86.4% | 60.1% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1281087 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.87 | 79.0 | 5.01e-01 | 96.6% | 27.2% |
| 5033803 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.85 | 80.0 | 5.79e-01 | 100.0% | 55.9% |
| 2576217 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.85 | 80.0 | 5.81e-01 | 100.0% | 56.5% |
| 4148563 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.83 | 78.0 | 4.77e-01 | 100.0% | 21.3% |
| 1297113 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.81 | 77.0 | 6.37e-01 | 100.0% | 78.3% |
| 3111877 | 207.1.1.169 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_14 | 0.74 | 67.0 | 4.75e-01 | 100.0% | 46.9% |
| 3870350 | 207.1.1.132 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_6, LRR_8 | 0.74 | 67.0 | 4.84e-01 | 100.0% | 49.4% |
| 3825849 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.73 | 66.0 | 4.54e-01 | 100.0% | 41.0% |
| 3225889 | 207.1.1.102 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1+LRR_8+LRR_14 | 0.73 | 67.0 | 5.04e-01 | 100.0% | 43.4% |
| 3831686 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.73 | 66.0 | 4.41e-01 | 100.0% | 36.2% |
| 3620857 | 207.1.1.141 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5, LRR_8 | 0.73 | 65.0 | 4.62e-01 | 100.0% | 46.5% |
| 3681537 | 207.1.1.132 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_6, LRR_8 | 0.73 | 66.0 | 4.53e-01 | 100.0% | 41.0% |
| 3333014 | 207.1.1.102 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1+LRR_8+LRR_14 | 0.73 | 66.0 | 4.69e-01 | 100.0% | 48.8% |
| 3247827 | 207.1.1.137 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_8 | 0.73 | 66.0 | 4.39e-01 | 100.0% | 35.9% |
| 1557587 | 207.1.1.102 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1+LRR_8+LRR_14 | 0.73 | 66.0 | 5.11e-01 | 100.0% | 65.8% |
| 4643073 | 207.1.1.147 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_8, LRR_14 | 0.73 | 66.0 | 4.47e-01 | 100.0% | 37.1% |
| 3321675 | 207.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 | 0.73 | 65.0 | 4.54e-01 | 100.0% | 43.8% |
| 3397376 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.73 | 65.0 | 4.79e-01 | 100.0% | 38.6% |
| 3756215 | 207.1.1.102 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1+LRR_8+LRR_14 | 0.72 | 65.0 | 4.42e-01 | 100.0% | 35.0% |
| None | — | 0.72 | 65.0 | 3.80e-01 | 100.0% | 17.4% | |
| 3334446 | 207.1.1.60 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRRNT_2,LRR_8 | 0.72 | 65.0 | 4.23e-01 | 100.0% | 34.0% |
| 3614725 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.72 | 65.0 | 4.44e-01 | 100.0% | 39.0% |
| 3450299 | 207.1.1.60 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRRNT_2,LRR_8 | 0.72 | 65.0 | 4.10e-01 | 100.0% | 28.5% |
| 4996091 | 207.1.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_4 | 0.72 | 65.0 | 4.71e-01 | 100.0% | 48.8% |
| None | — | 0.72 | 64.0 | 3.83e-01 | 100.0% | 19.7% | |
| 3780712 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.71 | 65.0 | 4.13e-01 | 100.0% | 25.5% |
| 3357134 | 207.1.1.60 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRRNT_2,LRR_8 | 0.71 | 63.0 | 3.87e-01 | 100.0% | 22.7% |
| 4328381 | 207.1.1.144 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4 | 0.71 | 64.0 | 4.32e-01 | 100.0% | 37.2% |
| 3594989 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.71 | 65.0 | 5.57e-01 | 100.0% | 85.2% |
| 5052221 | 207.1.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_4 | 0.71 | 64.0 | 4.25e-01 | 100.0% | 33.4% |
| 3826201 | 207.1.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRRNT_2 | 0.71 | 63.0 | 4.47e-01 | 100.0% | 46.5% |
| 3346425 | 207.1.1.163 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRRNT_2, LRR_6, LRR_8, LRR_14 | 0.71 | 64.0 | 4.39e-01 | 100.0% | 42.7% |
| 3608354 | 207.1.1.252 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6, LRR_At5g56370 | 0.71 | 63.0 | 4.71e-01 | 100.0% | 54.7% |
| 3337302 | 207.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 | 0.71 | 63.0 | 4.12e-01 | 100.0% | 31.5% |
| 3661709 | 207.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 | 0.71 | 63.0 | 5.83e-01 | 100.0% | 91.2% |
| 1607411 | 207.1.1.137 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_8 | 0.70 | 64.0 | 4.37e-01 | 100.0% | 39.6% |
| 3332217 | 207.1.1.60 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRRNT_2,LRR_8 | 0.70 | 63.0 | 4.06e-01 | 100.0% | 30.4% |
| 3599823 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.70 | 58.0 | 5.31e-01 | 88.6% | 69.9% |
| 3273679 | 207.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 | 0.70 | 63.0 | 5.03e-01 | 100.0% | 51.4% |
| 3369626 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.70 | 63.0 | 5.67e-01 | 100.0% | 85.0% |
| 3315898 | 207.1.1.103 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_R13L1-DRL21 | 0.70 | 63.0 | 3.80e-01 | 100.0% | 18.6% |
| 3910209 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.70 | 63.0 | 4.60e-01 | 100.0% | 51.5% |
| 3656679 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.69 | 62.0 | 4.58e-01 | 100.0% | 48.7% |
| 3367326 | 207.1.1.119 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_13 | 0.69 | 62.0 | 4.43e-01 | 100.0% | 69.8% |
| 3824403 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.68 | 61.0 | 3.79e-01 | 100.0% | 19.2% |
| 3305219 | 207.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 | 0.68 | 60.0 | 4.68e-01 | 100.0% | 50.5% |
| 5053587 | 207.1.1.24 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 | 0.67 | 60.0 | 4.92e-01 | 100.0% | 59.1% |
| 3258660 | 207.1.1.149 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_4, LRR_9 | 0.66 | 60.0 | 4.84e-01 | 100.0% | 60.6% |
| 3214514 | 207.1.1.5 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › Recep_L_domain | 0.63 | 56.0 | 4.82e-01 | 100.0% | 84.3% |
| 184833 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.62 | 55.0 | 5.32e-01 | 100.0% | 88.0% |
| 4889606 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.51 | 39.0 | 3.49e-01 | 86.4% | 84.6% |