←Back to structures
PHAGE-A6--js4906-27-3_S30_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00335
Bact-VirPHAGE-A6--js4906-27-3_S30_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00335
Identity
- Kingdom:
- phage
Quality
83.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-59
Domain cluster:
rep: BML_coassembly_scaffold_172_curated_closed_complete_prodigal-single.1__X__X__00359__D2-57
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4xzjA01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.75 | 55.0 | 3.73e-01 | 79.3% | 52.6% |
| 4rt0A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.74 | 58.0 | 4.69e-01 | 84.5% | 80.7% |
| 3prbA02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.72 | 52.0 | 5.88e-01 | 91.4% | 100.0% |
| 2derA02 | 2.30.30.280 | Mainly Beta › Roll › SH3 type barrels. › Adenine nucleotide alpha hydrolases-like domains | 0.69 | 62.0 | 5.82e-01 | 98.3% | 85.5% |
| 2zo4A01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.69 | 48.0 | 3.13e-01 | 72.4% | 61.1% |
| 2kcoA01 | 2.40.10.310 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.67 | 59.0 | 5.43e-01 | 100.0% | 90.8% |
| 1xm8A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.66 | 46.0 | 3.03e-01 | 74.1% | 43.7% |
| 4ad9A01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.66 | 46.0 | 3.16e-01 | 72.4% | 61.8% |
| 4ge6A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.66 | 47.0 | 2.98e-01 | 75.9% | 20.1% |
| 2xf4A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.65 | 45.0 | 3.10e-01 | 72.4% | 62.4% |
| 3laeA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.65 | 55.0 | 4.94e-01 | 94.8% | 100.0% |
| 3r2uB01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.65 | 45.0 | 3.01e-01 | 74.1% | 48.8% |
| 5wcmA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.65 | 44.0 | 2.92e-01 | 72.4% | 52.9% |
| 1qh5A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.64 | 45.0 | 2.98e-01 | 75.9% | 42.7% |
| 1vmeB01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.64 | 44.0 | 2.92e-01 | 72.4% | 48.6% |
| 6u10A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.63 | 44.0 | 2.85e-01 | 72.4% | 51.7% |
| 2pp6A02 | 2.40.10.210 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins (gpFII-like) | 0.63 | 52.0 | 5.09e-01 | 94.8% | 82.5% |
| 2shpB03 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.63 | 45.0 | 2.91e-01 | 75.9% | 20.9% |
| 3vpbE00 | 2.20.28.160 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.62 | 47.0 | 4.81e-01 | 100.0% | 85.7% |
| 2oaiA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.62 | 52.0 | 4.70e-01 | 94.8% | 96.2% |
| 2nqwA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.62 | 50.0 | 4.44e-01 | 91.4% | 97.7% |
| 1zpsA01 | 3.10.20.810 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphoribosyl-AMP cyclohydrolase | 0.62 | 51.0 | 4.45e-01 | 96.6% | 77.9% |
| 6n36A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.62 | 42.0 | 2.80e-01 | 72.4% | 52.8% |
| 6dq2A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.62 | 42.0 | 2.81e-01 | 72.4% | 52.7% |
| 2bw8A00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.61 | 46.0 | 3.13e-01 | 98.3% | 21.2% |
| 4awyB00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.61 | 42.0 | 2.78e-01 | 72.4% | 52.2% |
| 2wylC00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.61 | 43.0 | 2.75e-01 | 75.9% | 53.0% |
| 4mf9B01 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.60 | 41.0 | 3.02e-01 | 72.4% | 61.2% |
| 3g1pA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.57 | 46.0 | 3.08e-01 | 91.4% | 61.0% |
| 2cfuA01 | 3.60.15.30 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Metallo-beta-lactamase domain | 0.56 | 44.0 | 2.77e-01 | 89.7% | 50.4% |
| 4amcA01 | 2.30.30.20 | Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain | 0.56 | 36.0 | 3.91e-01 | 94.8% | 82.6% |
| 2rk9B00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.55 | 39.0 | 3.18e-01 | 79.3% | 37.6% |
| 6wimA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.53 | 44.0 | 4.11e-01 | 94.8% | 94.6% |
| 1k07A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.53 | 41.0 | 2.78e-01 | 89.7% | 58.8% |
| 4tvcA01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.53 | 43.0 | 3.02e-01 | 91.4% | 51.6% |
| 4j8tA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 43.0 | 3.45e-01 | 98.3% | 88.3% |
| 3d9wA02 | 2.40.128.150 | Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases | 0.51 | 40.0 | 3.56e-01 | 100.0% | 83.3% |
ECOD (64)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5049818 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.84 | 79.0 | 6.49e-01 | 100.0% | 61.1% |
| 4940104 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.83 | 75.0 | 6.12e-01 | 100.0% | 56.0% |
| 5004789 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.81 | 73.0 | 6.03e-01 | 100.0% | 58.9% |
| 3180421 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.81 | 73.0 | 6.80e-01 | 100.0% | 81.4% |
| 4964962 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.81 | 68.0 | 6.99e-01 | 94.8% | 96.4% |
| 4320001 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.80 | 74.0 | 6.29e-01 | 100.0% | 64.4% |
| 3805030 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.80 | 70.0 | 6.77e-01 | 100.0% | 84.6% |
| 3421199 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.80 | 70.0 | 5.87e-01 | 100.0% | 57.9% |
| 5018702 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.80 | 74.0 | 6.26e-01 | 100.0% | 65.6% |
| 3175516 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.80 | 72.0 | 5.94e-01 | 100.0% | 57.0% |
| 5015084 | 239.1.1.7 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH | 0.80 | 68.0 | 6.80e-01 | 100.0% | 90.0% |
| 4966140 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.79 | 71.0 | 5.90e-01 | 100.0% | 58.9% |
| 4950422 | 239.1.1.7 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH | 0.79 | 66.0 | 6.60e-01 | 100.0% | 88.3% |
| 3573551 | 4.6.1.5 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › tRNA_Me_trans_M | 0.79 | 68.0 | 5.89e-01 | 98.3% | 63.5% |
| 4936305 | 375.1.1.332 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › WH_Lhr | 0.79 | 62.0 | 6.38e-01 | 91.4% | 89.1% |
| 4343568 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.79 | 68.0 | 6.41e-01 | 94.8% | 81.4% |
| 3283031 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.78 | 69.0 | 5.80e-01 | 100.0% | 58.9% |
| 4958235 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.78 | 67.0 | 5.82e-01 | 100.0% | 63.5% |
| 5042402 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.78 | 67.0 | 6.70e-01 | 93.1% | 93.3% |
| 4992034 | 239.1.1.7 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH | 0.78 | 63.0 | 6.46e-01 | 96.6% | 92.7% |
| 4934433 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.78 | 63.0 | 6.46e-01 | 94.8% | 92.7% |
| 4956395 | 239.1.1.7 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH | 0.77 | 65.0 | 6.65e-01 | 100.0% | 96.4% |
| 5045021 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.77 | 65.0 | 6.50e-01 | 98.3% | 90.0% |
| 3289363 | 239.1.1.7 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH | 0.76 | 64.0 | 6.36e-01 | 100.0% | 90.0% |
| 5042815 | 239.1.1.15 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf | 0.75 | 66.0 | 5.97e-01 | 100.0% | 87.5% |
| 4950806 | 4.6.1.8 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › WH_Lhr | 0.74 | 59.0 | 6.07e-01 | 100.0% | 92.7% |
| 3960335 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.74 | 64.0 | 6.01e-01 | 100.0% | 80.0% |
| 5015989 | 239.1.1.7 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH | 0.72 | 58.0 | 6.00e-01 | 100.0% | 96.4% |
| 4956032 | 239.1.1.7 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH | 0.71 | 57.0 | 5.68e-01 | 100.0% | 88.3% |
| 4144572 | 4.6.1.5 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › tRNA_Me_trans_M | 0.70 | 62.0 | 5.46e-01 | 98.3% | 76.5% |
| 4968500 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.70 | 57.0 | 5.59e-01 | 100.0% | 85.7% |
| 4964644 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.69 | 54.0 | 5.55e-01 | 100.0% | 94.5% |
| 4294175 | 4.6.1.5 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › tRNA_Me_trans_M | 0.68 | 58.0 | 5.05e-01 | 96.6% | 82.2% |
| 3925961 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.67 | 47.0 | 2.97e-01 | 74.1% | 20.0% |
| 3617845 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.66 | 46.0 | 2.93e-01 | 72.4% | 41.8% |
| 3508453 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.65 | 39.0 | 4.59e-01 | 96.6% | 100.0% |
| 3507376 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.65 | 42.0 | 4.86e-01 | 98.3% | 97.5% |
| 3899335 | 356.1.1.2 ↗ | few secondary structure elements › PMP inhibitors › PMP inhibitors › PMP inhibitors › VWF | 0.64 | 37.0 | 4.29e-01 | 94.8% | 91.4% |
| 4933883 | 284.4.1.1 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain › FKBP26_IF | 0.64 | 50.0 | 5.30e-01 | 89.7% | 100.0% |
| 3515805 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.63 | 41.0 | 4.74e-01 | 98.3% | 97.5% |
| 3519410 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.62 | 40.0 | 4.66e-01 | 98.3% | 100.0% |
| 1109 | 10.1.1.15 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_12 | 0.61 | 46.0 | 3.13e-01 | 98.3% | 21.2% |
| 4981834 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.61 | 43.0 | 2.77e-01 | 75.9% | 62.9% |
| 3198313 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.60 | 47.0 | 4.40e-01 | 100.0% | 70.0% |
| 3519727 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.60 | 40.0 | 4.66e-01 | 94.8% | 100.0% |
| 3520959 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.59 | 35.0 | 4.19e-01 | 93.1% | 97.1% |
| 3805869 | 247.1.1.9 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › DRMBL | 0.58 | 41.0 | 2.80e-01 | 75.9% | 46.8% |
| 3519227 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.58 | 38.0 | 4.29e-01 | 98.3% | 95.0% |
| 3236647 | 5093.1.1.0 ↗ | a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein | 0.58 | 47.0 | 3.08e-01 | 100.0% | 55.4% |
| 3660002 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.57 | 42.0 | 3.17e-01 | 77.6% | 69.5% |
| 3224319 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.57 | 41.0 | 3.90e-01 | 100.0% | 64.3% |
| 3544420 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.56 | 46.0 | 4.31e-01 | 98.3% | 72.6% |
| 3438266 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.56 | 44.0 | 2.90e-01 | 89.7% | 73.3% |
| 3953904 | 217.2.1.1 ↗ | a+b complex topology › FAD-binding domain-like › CorC/HlyC domain-like › CorC/HlyC domain-like › CorC_HlyC | 0.56 | 45.0 | 3.91e-01 | 91.4% | 88.4% |
| 3515528 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.56 | 41.0 | 3.90e-01 | 98.3% | 65.7% |
| 3792873 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.55 | 36.0 | 4.10e-01 | 96.6% | 97.5% |
| 3507373 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.53 | 41.0 | 3.81e-01 | 100.0% | 65.3% |
| 3558025 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 40.0 | 2.59e-01 | 87.9% | 61.5% |
| 3278218 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.53 | 43.0 | 3.82e-01 | 96.6% | 94.4% |
| None | — | 0.53 | 37.0 | 2.96e-01 | 87.9% | 33.8% | |
| 3789126 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 38.0 | 2.43e-01 | 86.2% | 50.6% |
| 3687104 | 10.1.1.15 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_12 | 0.52 | 40.0 | 2.68e-01 | 96.6% | 19.4% |
| 3209511 | 2.1.1.219 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_cyt-4 | 0.51 | 43.0 | 3.61e-01 | 91.4% | 66.3% |
| 3932680 | 919.1.1.1 ↗ | few secondary structure elements › Ribosomal protein L36 › Ribosomal protein L36 › Ribosomal protein L36 › Ribosomal_L36 | 0.50 | 33.0 | 3.49e-01 | 91.4% | 78.0% |
D2
medium
residues 61-113
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1m2vB03 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.65 | 50.0 | 4.74e-01 | 81.1% | 72.6% |
| 2nutA02 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.64 | 49.0 | 4.66e-01 | 81.1% | 72.1% |
| 4ccgY00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.63 | 46.0 | 4.35e-01 | 79.2% | 79.1% |
| 7zj3D01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.60 | 42.0 | 3.76e-01 | 75.5% | 55.6% |
| 3v43A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 38.0 | 3.11e-01 | 71.7% | 55.4% |
| 3j7aZ00 | 3.30.1230.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 | 0.53 | 32.0 | 2.96e-01 | 98.1% | 40.3% |
| 5eyaF00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 36.0 | 3.31e-01 | 75.5% | 55.3% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5037997 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.78 | 51.0 | 5.68e-01 | 71.7% | 87.5% |
| 3226586 | 375.1.1.202 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Tmemb_55A | 0.72 | 47.0 | 5.22e-01 | 71.7% | 90.0% |
| 3303263 | 376.1.6.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › zf-LSD1 | 0.71 | 47.0 | 5.21e-01 | 73.6% | 90.0% |
| 3538506 | 375.1.1.217 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF26040 | 0.70 | 49.0 | 5.07e-01 | 73.6% | 78.0% |
| 5028378 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 47.0 | 5.08e-01 | 71.7% | 95.6% |
| 3601077 | 375.1.1.30 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-Sec23_Sec24 | 0.66 | 49.0 | 4.45e-01 | 79.2% | 60.0% |
| 4374415 | 375.1.1.30 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-Sec23_Sec24 | 0.64 | 48.0 | 4.32e-01 | 81.1% | 57.3% |
| 3600671 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 49.0 | 4.07e-01 | 81.1% | 47.8% |
| 3303403 | 375.1.1.30 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-Sec23_Sec24 | 0.63 | 48.0 | 3.57e-01 | 81.1% | 33.1% |
| 3523273 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.58 | 41.0 | 3.78e-01 | 75.5% | 57.1% |
| 3583273 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.58 | 38.0 | 4.06e-01 | 73.6% | 82.2% |
| 3879043 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.56 | 40.0 | 3.61e-01 | 75.5% | 53.3% |
| 3920079 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.56 | 43.0 | 3.76e-01 | 86.8% | 58.8% |