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PHAGE-A9--js4906-26-5_S28_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00065
Bact-VirPHAGE-A9--js4906-26-5_S28_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00065
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 28-67
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF20037.5 best | DUF6440 | 27.6 | 2.80e-06 | 100.0% | 71.7% |
CATH (76)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2r0cA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.87 | 69.0 | 4.09e-01 | 85.0% | 36.1% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.86 | 67.0 | 5.75e-01 | 85.0% | 61.9% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.85 | 74.0 | 6.00e-01 | 100.0% | 60.5% |
| 3f40A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.84 | 75.0 | 5.40e-01 | 100.0% | 41.4% |
| 2ns9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.82 | 72.0 | 4.82e-01 | 100.0% | 34.5% |
| 4ao8A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.82 | 71.0 | 4.36e-01 | 100.0% | 32.1% |
| 5fgoA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.82 | 69.0 | 5.99e-01 | 95.0% | 62.9% |
| 3en8A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.81 | 70.0 | 5.10e-01 | 100.0% | 41.1% |
| 2v8qA01 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.81 | 70.0 | 5.43e-01 | 100.0% | 55.1% |
| 1s6lA02 | 3.15.10.60 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Alkylmercury lyase | 0.81 | 67.0 | 4.68e-01 | 95.0% | 44.2% |
| 1yemB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.81 | 68.0 | 4.53e-01 | 100.0% | 27.7% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 61.0 | 5.22e-01 | 85.0% | 59.1% |
| 3fkaB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.80 | 69.0 | 4.92e-01 | 100.0% | 38.3% |
| 4orlA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.80 | 67.0 | 4.95e-01 | 100.0% | 85.5% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.79 | 69.0 | 4.74e-01 | 100.0% | 31.4% |
| 3iujA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.79 | 69.0 | 4.03e-01 | 100.0% | 13.6% |
| 4c57B00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.78 | 64.0 | 3.86e-01 | 100.0% | 27.6% |
| 7b9cA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.77 | 66.0 | 3.83e-01 | 100.0% | 26.3% |
| 4l2iB00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.77 | 57.0 | 3.42e-01 | 85.0% | 12.2% |
| 1rypD00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.77 | 63.0 | 3.92e-01 | 97.5% | 37.8% |
| 4o38A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.77 | 64.0 | 4.95e-01 | 100.0% | 88.5% |
| 2eigA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.76 | 63.0 | 3.93e-01 | 95.0% | 54.8% |
| 4nehA01 | 2.130.10.130 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal | 0.76 | 64.0 | 3.73e-01 | 100.0% | 14.1% |
| 5t5lA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.76 | 63.0 | 3.93e-01 | 95.0% | 56.3% |
| 1mpgA01 | 3.30.310.20 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain | 0.76 | 59.0 | 4.35e-01 | 90.0% | 35.7% |
| 3fssA01 | 2.30.29.120 | Mainly Beta › Roll › PH-domain like › | 0.75 | 64.0 | 4.44e-01 | 100.0% | 35.3% |
| 3a0oA03 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.75 | 62.0 | 3.77e-01 | 100.0% | 44.5% |
| 6mlyB01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.75 | 63.0 | 3.86e-01 | 100.0% | 19.5% |
| 4tm3A00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.74 | 54.0 | 3.08e-01 | 80.0% | 7.7% |
| 3q5zA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.74 | 62.0 | 4.52e-01 | 100.0% | 68.6% |
| 3tdgA01 | 3.10.450.520 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.74 | 64.0 | 5.48e-01 | 100.0% | 66.7% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 54.0 | 4.35e-01 | 82.5% | 42.2% |
| 5c17A00 | 3.30.450.410 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.73 | 60.0 | 3.83e-01 | 95.0% | 27.7% |
| 3zhaQ02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.73 | 62.0 | 4.38e-01 | 100.0% | 85.5% |
| 2bklA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.73 | 62.0 | 3.65e-01 | 100.0% | 12.4% |
| 2qg7B01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.72 | 62.0 | 4.66e-01 | 100.0% | 42.6% |
| 4i8oA02 | 3.30.160.690 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain | 0.72 | 60.0 | 4.76e-01 | 100.0% | 45.6% |
| 4ebrA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.72 | 57.0 | 3.92e-01 | 95.0% | 57.3% |
| 3gniB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.71 | 60.0 | 4.77e-01 | 100.0% | 89.9% |
| 4qqsB00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.71 | 59.0 | 3.52e-01 | 100.0% | 16.9% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 52.0 | 4.67e-01 | 80.0% | 58.9% |
| 2xe4A02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.71 | 58.0 | 3.45e-01 | 100.0% | 13.4% |
| 1mxgA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.70 | 60.0 | 4.59e-01 | 100.0% | 94.9% |
| 2xzsA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.70 | 57.0 | 4.56e-01 | 100.0% | 86.8% |
| 1jssA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.70 | 61.0 | 3.87e-01 | 100.0% | 75.9% |
| 3d4eA01 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.70 | 60.0 | 4.76e-01 | 100.0% | 51.2% |
| 2eabB01 | 2.70.98.50 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans | 0.70 | 60.0 | 3.71e-01 | 100.0% | 56.9% |
| 5ncsA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.69 | 58.0 | 4.06e-01 | 100.0% | 90.6% |
| 7ne4A01 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.69 | 56.0 | 3.35e-01 | 97.5% | 12.8% |
| 2nvnA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.69 | 58.0 | 4.15e-01 | 97.5% | 33.3% |
| 4m69A00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.69 | 57.0 | 3.50e-01 | 100.0% | 26.1% |
| 2i51B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.68 | 56.0 | 3.70e-01 | 100.0% | 78.0% |
| 2bs6A01 | 2.40.128.190 | Mainly Beta › Beta Barrel › Lipocalin › | 0.68 | 55.0 | 4.51e-01 | 100.0% | 48.8% |
| 1ln1A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.68 | 57.0 | 3.70e-01 | 100.0% | 73.4% |
| 1m2xA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.67 | 53.0 | 3.43e-01 | 97.5% | 89.5% |
| 8fkmA01 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.67 | 55.0 | 3.74e-01 | 100.0% | 60.4% |
| 3mepA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 52.0 | 3.54e-01 | 100.0% | 24.0% |
| 1ugiD00 | 3.10.450.20 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor | 0.66 | 54.0 | 4.48e-01 | 100.0% | 52.4% |
| 3a1jB00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.66 | 56.0 | 3.42e-01 | 100.0% | 88.1% |
| 2osxA01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.66 | 51.0 | 3.89e-01 | 87.5% | 75.8% |
| 2peeB02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.66 | 54.0 | 3.89e-01 | 100.0% | 67.9% |
| 1vq8A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 47.0 | 3.88e-01 | 80.0% | 42.3% |
| 4euuA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.66 | 53.0 | 4.33e-01 | 100.0% | 89.9% |
| 4harA00 | 3.10.50.50 | Alpha Beta › Roll › Chitinase A; domain 3 › Rubella virus capsid protein | 0.65 | 48.0 | 3.67e-01 | 82.5% | 36.7% |
| 1q57G01 | 2.20.25.180 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.64 | 51.0 | 4.28e-01 | 92.5% | 56.2% |
| 4dq2A03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 43.0 | 4.13e-01 | 85.0% | 59.6% |
| 1dceA02 | 2.60.40.1130 | Mainly Beta › Sandwich › Immunoglobulin-like › Rab geranylgeranyltransferase alpha-subunit, insert domain | 0.64 | 51.0 | 3.98e-01 | 100.0% | 68.9% |
| 1e69A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 46.0 | 2.85e-01 | 100.0% | 12.9% |
| 7lt2A01 | 3.30.460.90 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.62 | 43.0 | 2.77e-01 | 85.0% | 13.5% |
| 6gbuD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 41.0 | 3.77e-01 | 80.0% | 50.0% |
| 4ntqA00 | 3.10.380.20 | Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Novel toxin 21 (CdiA), C-terminal domain | 0.59 | 47.0 | 3.98e-01 | 95.0% | 50.0% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 41.0 | 3.74e-01 | 95.0% | 53.2% |
| 1ei5A01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.58 | 45.0 | 2.79e-01 | 100.0% | 77.3% |
| 1w1wA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 40.0 | 2.63e-01 | 100.0% | 33.9% |
| 4qq1C03 | 2.40.128.240 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 43.0 | 3.43e-01 | 100.0% | 43.2% |
| 2fggA01 | 3.30.160.240 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Rv1738 | 0.52 | 39.0 | 3.40e-01 | 92.5% | 73.3% |
ECOD (87)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4001579 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.91 | 81.0 | 5.74e-01 | 100.0% | 38.3% |
| 4636455 | 375.1.1.299 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf | 0.91 | 68.0 | 6.54e-01 | 80.0% | 71.1% |
| 3619927 | 9.2.1.6 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF7042 | 0.89 | 78.0 | 5.56e-01 | 100.0% | 38.3% |
| 3938746 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.88 | 79.0 | 4.47e-01 | 100.0% | 11.3% |
| 4278307 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.87 | 76.0 | 4.82e-01 | 100.0% | 22.1% |
| 5014898 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.86 | 73.0 | 4.09e-01 | 100.0% | 9.0% |
| 3255468 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.86 | 77.0 | 4.70e-01 | 100.0% | 17.8% |
| 3777589 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.86 | 76.0 | 4.30e-01 | 100.0% | 10.6% |
| 3472515 | 5.1.4.14 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N | 0.86 | 75.0 | 4.31e-01 | 100.0% | 12.7% |
| 3348291 | 243.1.1.53 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › WI12 | 0.86 | 75.0 | 4.97e-01 | 100.0% | 28.5% |
| 5063996 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.86 | 69.0 | 4.22e-01 | 92.5% | 16.0% |
| None | — | 0.84 | 75.0 | 4.96e-01 | 100.0% | 28.8% | |
| 5003245 | 243.8.1.0 ↗ | a+b two layers › Cystatin-like › Uracil-DNA glycosylase inhibitor protein › Uracil-DNA glycosylase inhibitor protein | 0.84 | 75.0 | 6.16e-01 | 100.0% | 58.6% |
| 5018922 | 7579.1.1.13 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DLH | 0.83 | 74.0 | 4.51e-01 | 100.0% | 30.6% |
| 3935899 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.83 | 72.0 | 4.16e-01 | 100.0% | 11.9% |
| 4936051 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 65.0 | 5.87e-01 | 90.0% | 63.6% |
| 3376441 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.82 | 71.0 | 4.16e-01 | 100.0% | 12.6% |
| 3213871 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.82 | 71.0 | 4.13e-01 | 100.0% | 12.6% |
| 5034088 | 3504.3.1.1 ↗ | beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N | 0.82 | 69.0 | 4.68e-01 | 100.0% | 27.3% |
| 4986260 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.81 | 71.0 | 4.18e-01 | 100.0% | 24.7% |
| 3257404 | 5.1.4.258 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 | 0.81 | 71.0 | 3.97e-01 | 100.0% | 12.6% |
| 3582457 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.80 | 69.0 | 4.01e-01 | 100.0% | 12.6% |
| 3617983 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.80 | 72.0 | 4.05e-01 | 100.0% | 11.0% |
| 3340222 | 3131.1.1.3 ↗ | a+b two layers › FYR domain › FYR domain › FYR domain › FYRC | 0.80 | 68.0 | 4.75e-01 | 95.0% | 32.0% |
| 5040649 | 5.1.4.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 | 0.80 | 69.0 | 4.31e-01 | 100.0% | 18.6% |
| 3999890 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.79 | 67.0 | 3.86e-01 | 100.0% | 10.8% |
| 4325086 | 2.4.1.11 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3 | 0.79 | 68.0 | 4.95e-01 | 95.0% | 45.6% |
| 4930329 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.79 | 61.0 | 5.70e-01 | 85.0% | 68.0% |
| 1147819 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.79 | 69.0 | 5.19e-01 | 100.0% | 47.5% |
| 3799100 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.79 | 69.0 | 4.02e-01 | 100.0% | 12.9% |
| 3705072 | 719.1.1.0 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain | 0.79 | 64.0 | 4.69e-01 | 95.0% | 33.9% |
| 4938919 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 60.0 | 5.14e-01 | 85.0% | 52.3% |
| 3576886 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.78 | 65.0 | 3.92e-01 | 100.0% | 17.7% |
| 4214866 | 2004.1.1.429 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 | 0.78 | 67.0 | 3.87e-01 | 100.0% | 27.3% |
| 3485537 | 5.1.4.223 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd | 0.78 | 66.0 | 3.70e-01 | 100.0% | 9.0% |
| 3472174 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.78 | 66.0 | 3.73e-01 | 100.0% | 9.7% |
| 4497599 | 2.4.1.11 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3 | 0.78 | 66.0 | 4.80e-01 | 95.0% | 47.6% |
| None | — | 0.78 | 68.0 | 3.92e-01 | 100.0% | 27.9% | |
| 4436471 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.78 | 67.0 | 4.81e-01 | 95.0% | 44.8% |
| 3890928 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.78 | 65.0 | 4.29e-01 | 100.0% | 23.3% |
| 5054384 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.77 | 65.0 | 5.54e-01 | 100.0% | 68.6% |
| 4457428 | 2.4.1.11 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3 | 0.77 | 66.0 | 4.71e-01 | 95.0% | 45.5% |
| 4861411 | 5.1.4.58 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF5074 | 0.77 | 65.0 | 3.86e-01 | 100.0% | 14.7% |
| 4342741 | 243.19.1.3 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains › XkdV_N | 0.76 | 64.0 | 5.13e-01 | 100.0% | 48.2% |
| 3998976 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.76 | 54.0 | 5.21e-01 | 75.0% | 68.9% |
| 3782542 | 6109.1.1.1 ↗ | a+b two layers › N-terminal domain of chitin biosynthesis protein CHS6 › N-terminal domain of chitin biosynthesis protein CHS6 › N-terminal domain of chitin biosynthesis protein CHS6 › ChAPs | 0.76 | 64.0 | 4.12e-01 | 95.0% | 48.9% |
| 5061515 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.75 | 59.0 | 4.30e-01 | 82.5% | 34.3% |
| 4059006 | 9.9.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein YwiB › Hypothetical protein YwiB | 0.75 | 63.0 | 4.56e-01 | 100.0% | 45.6% |
| 4032029 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.75 | 63.0 | 4.89e-01 | 100.0% | 43.2% |
| 3230371 | 3180.1.1.0 ↗ | a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related | 0.75 | 63.0 | 4.66e-01 | 100.0% | 36.4% |
| 3279818 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.75 | 60.0 | 4.18e-01 | 95.0% | 46.5% |
| 4059013 | 5.1.4.481 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BNR, Sortilin-Vps10 | 0.75 | 64.0 | 3.40e-01 | 100.0% | 4.6% |
| 4402089 | 5.1.7.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 | 0.75 | 64.0 | 3.39e-01 | 100.0% | 4.5% |
| 3929846 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.74 | 62.0 | 3.74e-01 | 100.0% | 13.6% |
| 5004346 | 331.19.1.0 ↗ | a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains | 0.74 | 62.0 | 4.96e-01 | 100.0% | 50.6% |
| 4192062 | 5.1.7.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 | 0.74 | 63.0 | 3.36e-01 | 100.0% | 3.8% |
| 3717196 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.73 | 60.0 | 3.81e-01 | 100.0% | 38.7% |
| 4960364 | 243.1.1.23 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF3887 | 0.72 | 60.0 | 4.54e-01 | 100.0% | 43.8% |
| 4499269 | 5.1.7.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 | 0.72 | 62.0 | 3.46e-01 | 100.0% | 12.3% |
| 4132501 | 5.1.7.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 | 0.72 | 59.0 | 3.16e-01 | 100.0% | 3.4% |
| 4347893 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.71 | 61.0 | 3.60e-01 | 100.0% | 12.5% |
| 3591269 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.71 | 58.0 | 3.49e-01 | 100.0% | 15.6% |
| 3737480 | 5.1.7.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 | 0.71 | 60.0 | 3.39e-01 | 100.0% | 8.0% |
| 5028140 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.71 | 59.0 | 4.95e-01 | 100.0% | 66.7% |
| 4594778 | 5.1.7.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 | 0.71 | 59.0 | 3.15e-01 | 100.0% | 3.9% |
| 3191149 | 5.1.7.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 | 0.71 | 60.0 | 3.36e-01 | 100.0% | 7.5% |
| 4081797 | 3860.1.1.158 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › ThrE | 0.71 | 52.0 | 3.61e-01 | 82.5% | 47.6% |
| 3449739 | 207.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 | 0.71 | 55.0 | 3.23e-01 | 97.5% | 9.6% |
| 1900833 | 2004.1.1.429 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 | 0.70 | 58.0 | 4.12e-01 | 100.0% | 73.3% |
| 4938162 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 58.0 | 4.56e-01 | 95.0% | 43.3% |
| 2538670 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.70 | 59.0 | 5.42e-01 | 100.0% | 79.6% |
| 4031833 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.70 | 57.0 | 5.04e-01 | 90.0% | 60.0% |
| 5057420 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.69 | 59.0 | 3.52e-01 | 100.0% | 14.3% |
| 4040937 | 5.1.7.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 | 0.69 | 57.0 | 3.02e-01 | 100.0% | 4.0% |
| 4508539 | 5.1.7.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › BNR, Sortilin-Vps10 | 0.68 | 55.0 | 3.09e-01 | 100.0% | 6.9% |
| 4204450 | 2004.1.1.442 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21 | 0.67 | 55.0 | 3.27e-01 | 97.5% | 26.7% |
| 5008207 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 54.0 | 4.43e-01 | 95.0% | 47.5% |
| 4199352 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.67 | 55.0 | 3.25e-01 | 100.0% | 27.2% |
| 3970514 | 11.1.1.1065 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF25971 | 0.65 | 56.0 | 4.23e-01 | 100.0% | 66.0% |
| 4032161 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.65 | 55.0 | 4.80e-01 | 100.0% | 65.6% |
| 3756559 | 11.1.4.74 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › FAM171A1-2-B_N | 0.63 | 55.0 | 3.35e-01 | 100.0% | 42.7% |
| 3983524 | 274.1.1.13 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › GspH | 0.63 | 52.0 | 3.66e-01 | 100.0% | 95.3% |
| 3887475 | 12.5.1.15 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › FAM171A1-2-B_N | 0.63 | 54.0 | 3.57e-01 | 100.0% | 64.1% |
| 5047074 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.57 | 41.0 | 2.55e-01 | 100.0% | 27.0% |
| 3394577 | 7039.1.1.1 ↗ | a+b complex topology › Helical domain of PCIF1/CAPAM › Helical domain of PCIF1/CAPAM › Helical domain of PCIF1/CAPAM › PCIF1_WW | 0.57 | 46.0 | 2.98e-01 | 97.5% | 87.0% |
| 5051613 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 44.0 | 3.39e-01 | 100.0% | 39.0% |
| 4110324 | 4.1.1.252 ↗ | beta barrels › SH3 › SH3 › SH3 › MdcG_N | 0.56 | 42.0 | 3.48e-01 | 85.0% | 45.0% |