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PIF-6

Euk-Vir

Spodoptera_eridania_nucleopolyhedrovirus

PIF-6__YP_010087092__Spodoptera_eridania_nucleopolyhedrovirus__2315721

Identity

Accession:: YP_010087092 ↗
Protein ID:: PIF-6
Kingdom:: euk

Quality

77.2 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Spodoptera_eridania_nucleopolyhedrovirus

TaxID: 2315721

Cluster

View cluster (46 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-79

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05341.18 best	PIF6	118.7	1.40e-34	100.0%	73.1%

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2iskA01	3.40.109.10	Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase	0.65	51.0	3.79e-01	85.5%	74.1%
5cq2A02	2.20.70.10	Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; ›	0.64	28.0	3.55e-01	85.5%	67.4%
6pz0A01	3.40.109.10	Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase	0.63	48.0	3.83e-01	84.2%	84.0%
2oh1C00	3.40.630.30	Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT)	0.59	49.0	3.89e-01	96.1%	68.0%
3jrqA00	3.60.40.10	Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain	0.53	39.0	2.73e-01	78.9%	55.4%
2o28A01	3.40.630.30	Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT)	0.53	39.0	3.18e-01	81.6%	98.8%
2wsaA00	3.40.630.170	Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase ›	0.52	43.0	2.80e-01	96.1%	22.9%
4kfuA00	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.52	35.0	2.70e-01	72.4%	92.2%
2rgjA02	3.30.9.30	Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 ›	0.51	37.0	2.79e-01	78.9%	57.7%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3263503	331.4.1.9 ↗	a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C	0.56	32.0	3.24e-01	100.0%	53.3%
5046318	213.1.1.0 ↗	a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat)	0.55	45.0	3.59e-01	92.1%	53.9%
3650233	2.1.1.0 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein	0.52	34.0	3.84e-01	82.9%	92.7%
3805134	213.1.1.4 ↗	a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › NMT	0.52	42.0	3.27e-01	96.1%	51.8%
4982094	213.1.1.0 ↗	a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat)	0.52	42.0	3.30e-01	92.1%	44.7%
3287644	225.1.1.6 ↗	a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_2	0.51	41.0	3.50e-01	89.5%	95.4%
3820823	210.2.1.1 ↗	a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C	0.51	37.0	2.62e-01	78.9%	54.8%
3366484	210.2.1.1 ↗	a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C	0.50	43.0	2.97e-01	98.7%	52.6%
5066317	304.51.1.21 ↗	a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › PF27225	0.50	40.0	3.24e-01	92.1%	61.8%