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PIF1-like_helicase

Euk-Vir

Pandoravirus_inopinatum

PIF1-like_helicase__YP_009120282__Pandoravirus_inopinatum__1605721

Identity

Accession:: YP_009120282 ↗
Protein ID:: PIF1-like_helicase
Kingdom:: euk

Quality

77.8 mean pLDDT

Cluster

View cluster (90 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 27-108_150-205

PDB

Domain cluster: rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05970.21 best	PIF1	48.7	1.10e-12	58.0%	30.0%

D2 medium residues 109-149_489-513

PDB

Domain cluster: representative

D3 medium residues 206-275_310-340_430-488

PDB

Domain cluster: rep: IMGVR_UViG_3300009509_000914-3300009509-Ga0123573_1001185116__D490-580_655-727

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF21530.4 best	Pif1_2B_dom	43.6	2.70e-11	25.6%	72.3%

D4 medium residues 341-360_391-429

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3mjqA00	3.30.450.20	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain	0.50	29.0	2.36e-01	96.6%	30.8%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3251896	4.1.1.140 ↗	beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom	0.71	55.0	4.36e-01	100.0%	42.6%
3255737	4.1.1.140 ↗	beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom	0.70	58.0	4.52e-01	100.0%	44.2%
3363136	4.1.1.140 ↗	beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom	0.67	57.0	4.49e-01	100.0%	45.8%
3701220	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.66	59.0	4.45e-01	100.0%	55.7%
3267759	4.1.1.140 ↗	beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom	0.64	57.0	4.17e-01	100.0%	52.5%
3702850	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.63	56.0	4.23e-01	100.0%	50.7%
5048057	223.1.1.13 ↗	a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3	0.59	35.0	2.74e-01	94.9%	29.2%
5055894	223.1.1.2 ↗	a+b three layers › Profilin-like › sensor domains › sensor domains › PAS	0.56	32.0	2.51e-01	94.9%	26.4%
4980704	223.1.1.0 ↗	a+b three layers › Profilin-like › sensor domains › sensor domains	0.54	32.0	2.67e-01	96.6%	30.9%
4988947	223.1.1.2 ↗	a+b three layers › Profilin-like › sensor domains › sensor domains › PAS	0.53	30.0	2.26e-01	94.9%	22.8%
3507846	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.51	36.0	2.06e-01	74.6%	17.2%
4982762	2011.2.1.7 ↗	a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2	0.51	41.0	2.76e-01	91.5%	37.4%
3722822	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.50	38.0	2.29e-01	84.7%	12.6%