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PLM4_65_coex_sep16_scaffold_0_prodigal-single.1__X__X__00001
Bact-VirPLM4_65_coex_sep16_scaffold_0_prodigal-single.1__X__X__00001
Identity
- Kingdom:
- phage
Quality
87.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-136
Domain cluster:
rep: LacPavin_0818_WC55_scaffold_0-10091_curated_closed_complete_start-adj_prodigal-single.1__X__X__00047__D194-294
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1kbaA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.56 | 29.0 | 3.76e-01 | 73.6% | 93.9% |
| 1zq1A02 | 3.40.50.1170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › L-asparaginase, N-terminal domain | 0.54 | 39.0 | 3.28e-01 | 76.0% | 86.0% |
| 1mvpA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.50 | 33.0 | 3.53e-01 | 76.8% | 75.9% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3893956 | 284.1.1.17 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › SBSPON_C | 0.63 | 44.0 | 5.06e-01 | 90.4% | 95.8% |
| 3515376 | 284.1.1.17 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › SBSPON_C | 0.62 | 48.0 | 5.24e-01 | 88.8% | 96.2% |
| 3580927 | 284.1.1.17 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › SBSPON_C | 0.58 | 49.0 | 4.97e-01 | 88.8% | 100.0% |
| 3948928 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.56 | 29.0 | 3.50e-01 | 76.0% | 76.2% |
| 3265985 | 3529.1.1.0 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain | 0.54 | 23.0 | 3.56e-01 | 75.2% | 100.0% |
| 1296875 | 382.1.1.7 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_cobra-type | 0.54 | 29.0 | 3.61e-01 | 80.0% | 87.5% |
| 3246470 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.53 | 39.0 | 4.08e-01 | 76.0% | 93.6% |
| 3274038 | 11.1.4.71 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › NOMO1-like_7th | 0.52 | 29.0 | 3.28e-01 | 78.4% | 73.3% |
| 3755463 | 382.1.1.1 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 | 0.51 | 32.0 | 3.63e-01 | 80.0% | 86.7% |
| 3930500 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.50 | 37.0 | 3.96e-01 | 78.4% | 95.5% |