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PLM4_65_coex_sep16_scaffold_0_prodigal-single.1__X__X__00102
Bact-VirPLM4_65_coex_sep16_scaffold_0_prodigal-single.1__X__X__00102
Identity
- Kingdom:
- phage
Quality
84.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 123-235
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_193576_prodigal-single.1__X__X__00294__D106-220
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04480.19 best | DUF559 | 22.3 | 1.40e-04 | 96.5% | 72.5% |
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3r3pB00 | 3.40.960.10 | Alpha Beta › 3-Layer(aba) Sandwich › Endonuclease; Chain A › VSR Endonuclease | 0.87 | 69.0 | 7.38e-01 | 100.0% | 94.9% |
| 1vsrA00 | 3.40.960.10 | Alpha Beta › 3-Layer(aba) Sandwich › Endonuclease; Chain A › VSR Endonuclease | 0.80 | 75.0 | 7.00e-01 | 100.0% | 87.3% |
| 4qboA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.72 | 53.0 | 5.77e-01 | 100.0% | 94.6% |
| 5awhA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 59.0 | 4.99e-01 | 100.0% | 73.2% |
| 1q44A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 57.0 | 4.18e-01 | 100.0% | 58.1% |
| 3qq5A02 | 3.40.50.11420 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 40.0 | 4.11e-01 | 92.0% | 67.9% |
| 3lucA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 51.0 | 4.96e-01 | 100.0% | 81.2% |
| 2reoA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 56.0 | 4.52e-01 | 100.0% | 60.9% |
| 1g0nB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 54.0 | 4.19e-01 | 100.0% | 82.7% |
| 1t9hA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 44.0 | 4.05e-01 | 87.6% | 58.9% |
| 4rgbA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 52.0 | 4.04e-01 | 100.0% | 87.2% |
| 2bd0A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 52.0 | 4.17e-01 | 99.1% | 91.5% |
| 6ln3A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 53.0 | 4.37e-01 | 100.0% | 92.1% |
| 4fdaA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 51.0 | 4.04e-01 | 100.0% | 94.7% |
| 3fovA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.57 | 45.0 | 4.77e-01 | 98.2% | 94.1% |
| 4q34A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 51.0 | 3.73e-01 | 100.0% | 81.6% |
| 7whfC02 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.57 | 34.0 | 3.61e-01 | 94.7% | 66.0% |
| 3qk7A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 47.0 | 4.47e-01 | 100.0% | 77.5% |
| 4w88B00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 45.0 | 3.21e-01 | 88.5% | 88.5% |
| 2lxxA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.54 | 43.0 | 3.94e-01 | 85.8% | 85.5% |
| 5hn3A00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.53 | 47.0 | 3.44e-01 | 100.0% | 80.1% |
| 1m2oA05 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.53 | 40.0 | 4.18e-01 | 80.5% | 93.3% |
| 1irxA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 42.0 | 3.41e-01 | 86.7% | 77.2% |
| 1avaA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 41.0 | 3.00e-01 | 87.6% | 92.2% |
| 2mp4A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.50 | 40.0 | 3.59e-01 | 86.7% | 85.5% |
ECOD (65)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3235677 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.89 | 79.0 | 7.70e-01 | 92.0% | 97.5% |
| 4940296 | 2008.1.1.121 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › MTES_1575 | 0.88 | 72.0 | 7.78e-01 | 100.0% | 100.0% |
| 5038840 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.86 | 67.0 | 7.11e-01 | 98.2% | 91.0% |
| 3959070 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.85 | 72.0 | 6.44e-01 | 100.0% | 66.7% |
| 4995722 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.84 | 71.0 | 7.53e-01 | 98.2% | 100.0% |
| 3962618 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.84 | 71.0 | 6.94e-01 | 100.0% | 83.3% |
| 5069856 | 2008.1.1.17 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF559 | 0.83 | 69.0 | 6.92e-01 | 99.1% | 85.2% |
| 3808239 | 2008.1.1.86 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP | 0.83 | 71.0 | 7.50e-01 | 99.1% | 100.0% |
| 3964563 | 2008.1.1.14 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Vsr | 0.82 | 78.0 | 7.16e-01 | 100.0% | 82.9% |
| 4995749 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.82 | 71.0 | 7.26e-01 | 100.0% | 94.5% |
| 4028819 | 2008.1.1.86 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP | 0.82 | 70.0 | 7.28e-01 | 100.0% | 97.1% |
| 3979018 | 2008.1.1.14 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Vsr | 0.81 | 76.0 | 6.82e-01 | 100.0% | 78.7% |
| 3281852 | 2008.1.1.14 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Vsr | 0.81 | 76.0 | 6.88e-01 | 100.0% | 78.6% |
| 4940995 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.81 | 71.0 | 7.28e-01 | 99.1% | 95.5% |
| 3953141 | 2008.1.1.121 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › MTES_1575 | 0.81 | 68.0 | 7.05e-01 | 100.0% | 96.2% |
| 5053107 | 2008.1.1.14 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Vsr | 0.80 | 72.0 | 6.89e-01 | 98.2% | 83.7% |
| 5056125 | 2008.1.1.14 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Vsr | 0.80 | 76.0 | 7.19e-01 | 100.0% | 87.7% |
| 4336609 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.80 | 68.0 | 6.58e-01 | 100.0% | 82.1% |
| 4030733 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.79 | 66.0 | 6.88e-01 | 100.0% | 95.2% |
| 4467650 | 2008.1.1.167 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Vsr, DUF559 | 0.78 | 72.0 | 6.81e-01 | 100.0% | 84.4% |
| 4028756 | 2008.1.1.86 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP | 0.78 | 65.0 | 5.72e-01 | 100.0% | 61.9% |
| 4984120 | 2008.1.1.17 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF559 | 0.78 | 68.0 | 7.06e-01 | 100.0% | 100.0% |
| 4026721 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.77 | 63.0 | 6.65e-01 | 97.3% | 97.0% |
| 4027159 | 2008.1.1.86 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP | 0.76 | 67.0 | 6.73e-01 | 100.0% | 92.2% |
| 3262617 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.75 | 62.0 | 6.30e-01 | 85.8% | 100.0% |
| 4954232 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.75 | 51.0 | 5.97e-01 | 76.1% | 98.8% |
| 4927469 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.72 | 67.0 | 6.49e-01 | 100.0% | 95.2% |
| 4025795 | 2008.1.1.86 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP | 0.72 | 67.0 | 6.39e-01 | 100.0% | 89.2% |
| 4981044 | 2004.1.1.197 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sulfotransfer_3 | 0.63 | 59.0 | 4.49e-01 | 100.0% | 73.5% |
| 3199435 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.63 | 54.0 | 4.64e-01 | 92.0% | 66.3% |
| 4979146 | 2008.1.1.107 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD | 0.63 | 56.0 | 5.00e-01 | 98.2% | 80.0% |
| 4946865 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 54.0 | 5.50e-01 | 92.9% | 100.0% |
| 4947215 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.62 | 56.0 | 4.52e-01 | 100.0% | 79.1% |
| 9576 | 2004.1.1.51 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sulfotransfer_1 | 0.61 | 57.0 | 4.31e-01 | 100.0% | 65.0% |
| 5073133 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.61 | 56.0 | 5.09e-01 | 100.0% | 86.0% |
| 5010842 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.61 | 53.0 | 4.80e-01 | 95.6% | 80.6% |
| 3818934 | 2004.1.1.51 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sulfotransfer_1 | 0.60 | 55.0 | 4.14e-01 | 100.0% | 50.0% |
| 3343894 | 2007.6.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › PGI | 0.59 | 53.0 | 4.43e-01 | 100.0% | 67.7% |
| 3653315 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.59 | 42.0 | 3.26e-01 | 75.2% | 45.5% |
| 3990603 | 2496.1.1.0 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like | 0.58 | 42.0 | 3.56e-01 | 75.2% | 77.8% |
| 4332382 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.58 | 48.0 | 4.79e-01 | 98.2% | 85.7% |
| 4239378 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.56 | 46.0 | 4.56e-01 | 95.6% | 82.1% |
| 4311371 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.56 | 49.0 | 4.81e-01 | 95.6% | 89.2% |
| 4066769 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.56 | 47.0 | 4.81e-01 | 98.2% | 94.4% |
| 4139009 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.56 | 48.0 | 4.83e-01 | 98.2% | 93.0% |
| 4315832 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.56 | 47.0 | 4.74e-01 | 98.2% | 90.4% |
| 4670340 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.55 | 48.0 | 4.79e-01 | 98.2% | 93.0% |
| 4394279 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.55 | 48.0 | 4.71e-01 | 98.2% | 89.2% |
| 4459358 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.55 | 47.0 | 4.69e-01 | 98.2% | 88.3% |
| 4060516 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.55 | 47.0 | 4.67e-01 | 98.2% | 92.2% |
| 4141864 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.54 | 48.0 | 4.74e-01 | 98.2% | 92.4% |
| 1106820 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.54 | 43.0 | 3.94e-01 | 85.8% | 85.5% |
| 4407114 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.54 | 48.0 | 4.76e-01 | 98.2% | 91.7% |
| 4468301 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.54 | 48.0 | 4.79e-01 | 98.2% | 93.3% |
| 5050093 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.54 | 37.0 | 4.12e-01 | 80.5% | 90.0% |
| 5055270 | 2005.1.1.17 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f | 0.54 | 43.0 | 3.22e-01 | 85.8% | 74.1% |
| 4485358 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.54 | 41.0 | 3.90e-01 | 81.4% | 74.1% |
| 4666672 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.54 | 46.0 | 4.65e-01 | 98.2% | 93.0% |
| 4329875 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.53 | 47.0 | 4.62e-01 | 98.2% | 89.6% |
| 4458401 | 375.1.1.17 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1f | 0.53 | 42.0 | 3.16e-01 | 84.1% | 78.2% |
| 3545797 | 2004.1.1.122 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IIGP | 0.53 | 44.0 | 3.13e-01 | 94.7% | 43.3% |
| 3773044 | 2004.1.1.122 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IIGP | 0.53 | 45.0 | 2.68e-01 | 97.3% | 16.1% |
| 3271039 | 2006.1.4.19 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N | 0.53 | 37.0 | 3.70e-01 | 88.5% | 70.4% |
| 3855896 | 2004.1.1.122 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IIGP | 0.51 | 44.0 | 3.14e-01 | 100.0% | 43.0% |
| 4932343 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.50 | 44.0 | 3.79e-01 | 100.0% | 86.8% |
D2
medium
residues 38-82
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2od1A00 | 6.10.140.2220 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 51.0 | 4.94e-01 | 95.6% | 78.0% |
| 4tmaJ00 | 3.30.50.10 | Alpha Beta › 2-Layer Sandwich › Erythroid Transcription Factor GATA-1; Chain A › Erythroid Transcription Factor GATA-1, subunit A | 0.65 | 54.0 | 4.99e-01 | 97.8% | 71.9% |
| 6ia6A01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.60 | 52.0 | 3.26e-01 | 100.0% | 64.9% |
| 3mydA01 | 3.40.30.60 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 | 0.56 | 44.0 | 3.09e-01 | 86.7% | 94.4% |
| 2pw9C02 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.55 | 41.0 | 3.95e-01 | 93.3% | 77.6% |
| 2kmaA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 42.0 | 3.64e-01 | 95.6% | 100.0% |
| 2w0tA00 | 3.30.60.160 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.54 | 44.0 | 4.55e-01 | 97.8% | 100.0% |
| 1l1qA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 44.0 | 3.04e-01 | 97.8% | 62.4% |
| 3mekA02 | 6.10.140.2220 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 40.0 | 3.96e-01 | 91.1% | 83.7% |
| 2wawA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.52 | 46.0 | 3.00e-01 | 100.0% | 96.5% |
| 2aw4Z00 | 4.10.830.30 | Few Secondary Structures › Irregular › 30s Ribosomal Protein S14; Chain N › Ribosomal protein L31 | 0.52 | 35.0 | 3.20e-01 | 75.6% | 50.0% |
| 2qr4A02 | 1.10.287.830 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › putative peptidase helix hairpin domain like | 0.51 | 40.0 | 3.99e-01 | 86.7% | 83.0% |
| 1w36B03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 46.0 | 2.78e-01 | 100.0% | 42.8% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3963491 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 49.0 | 5.11e-01 | 84.4% | 87.5% |
| 3714085 | 377.9.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-MYND | 0.66 | 52.0 | 5.48e-01 | 95.6% | 97.5% |
| 3304827 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.65 | 41.0 | 4.32e-01 | 71.1% | 72.5% |
| 3254381 | 377.9.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-MYND | 0.65 | 56.0 | 5.33e-01 | 100.0% | 85.5% |
| 3368329 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.62 | 41.0 | 4.19e-01 | 75.6% | 72.1% |
| 3611033 | 3681.1.1.0 ↗ | a+b complex topology › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit | 0.61 | 46.0 | 3.49e-01 | 84.4% | 82.6% |
| 3891726 | 2003.1.2.103 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Prenylcys_lyase, NAD_binding_8 | 0.59 | 46.0 | 2.65e-01 | 86.7% | 64.1% |
| 5009614 | 239.4.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N_2 | 0.58 | 44.0 | 3.60e-01 | 88.9% | 89.5% |
| 3509877 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.58 | 37.0 | 3.92e-01 | 71.1% | 75.0% |
| 4995058 | 239.4.1.1 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N | 0.58 | 46.0 | 4.00e-01 | 97.8% | 98.8% |
| 3205904 | 222.1.1.8 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_2 | 0.57 | 46.0 | 3.18e-01 | 100.0% | 71.6% |
| 3541 | 4107.1.1.1 ↗ | alpha arrays › Jann2411-like › Jann2411-like › Jann2411-like › ABATE,zf-CGNR | 0.57 | 47.0 | 3.13e-01 | 95.6% | 58.7% |
| 3816375 | 386.1.1.7 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-U11-48K | 0.56 | 40.0 | 4.03e-01 | 100.0% | 82.2% |
| 2721321 | 386.1.1.7 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-U11-48K | 0.55 | 33.0 | 3.67e-01 | 75.6% | 77.1% |
| 3385565 | 320.1.1.16 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › HP0268 | 0.53 | 42.0 | 3.54e-01 | 88.9% | 70.5% |
| 3618953 | 386.1.1.7 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-U11-48K | 0.51 | 35.0 | 3.62e-01 | 88.9% | 97.1% |
| 3404685 | 386.1.1.7 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-U11-48K | 0.50 | 34.0 | 3.53e-01 | 80.0% | 100.0% |