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PLM4_65_coex_sep16_scaffold_0_prodigal-single.1__X__X__00200
Bact-VirPLM4_65_coex_sep16_scaffold_0_prodigal-single.1__X__X__00200
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 165-273
Domain cluster:
rep: IMGVR_UViG_3300004639_000117-3300004639-Ga0066620_10284565__D67-153
D2
medium
residues 2-66
Domain cluster:
rep: Filtrate_w_scaffold_3_prodigal-single.1__X__X__00157__D1-61
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1cy9A01 | 1.10.290.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 | 0.58 | 36.0 | 2.95e-01 | 73.8% | 34.7% |
| 1a2fA02 | 1.10.420.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 2 › Peroxidase, domain 2 | 0.55 | 42.0 | 3.44e-01 | 83.1% | 90.1% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3509728 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.62 | 43.0 | 4.65e-01 | 95.4% | 87.3% |
| 3570151 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.61 | 46.0 | 4.62e-01 | 93.8% | 78.5% |
| 3777923 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.61 | 45.0 | 3.64e-01 | 93.8% | 40.8% |
| 3631312 | 386.1.1.213 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_13 | 0.56 | 49.0 | 3.73e-01 | 100.0% | 56.9% |
| 3182607 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.55 | 42.0 | 4.20e-01 | 80.0% | 87.7% |
| 3412257 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.55 | 41.0 | 4.30e-01 | 100.0% | 96.6% |
| 4152427 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.51 | 45.0 | 4.41e-01 | 100.0% | 98.6% |