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PLM4_65_coex_sep16_scaffold_0_prodigal-single.1__X__X__00308

Bact-Vir

PLM4_65_coex_sep16_scaffold_0_prodigal-single.1__X__X__00308

Identity

Kingdom:
phage

Quality

75.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 16-102
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6i3mE01 1.20.120.420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 0.51 35.0 3.08e-01 71.3% 86.1%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3366253 109.4.1.2171 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30921, PF30924 0.54 41.0 2.67e-01 81.6% 62.8%
4960326 601.1.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.52 38.0 3.35e-01 78.2% 60.8%
3595789 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 43.0 2.56e-01 92.0% 21.7%
4146804 101.1.2.170 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_51 0.51 36.0 3.35e-01 74.7% 76.5%
3687239 109.4.1.563 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF3437 0.51 40.0 3.02e-01 85.1% 90.4%
3585493 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.50 36.0 3.09e-01 74.7% 50.0%
3721335 109.4.1.356 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.50 44.0 2.85e-01 100.0% 51.3%