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PLM4_65_coex_sep16_scaffold_0_prodigal-single.1__X__X__00308
Bact-VirPLM4_65_coex_sep16_scaffold_0_prodigal-single.1__X__X__00308
Identity
- Kingdom:
- phage
Quality
75.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 16-102
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6i3mE01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.51 | 35.0 | 3.08e-01 | 71.3% | 86.1% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3366253 | 109.4.1.2171 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30921, PF30924 | 0.54 | 41.0 | 2.67e-01 | 81.6% | 62.8% |
| 4960326 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.52 | 38.0 | 3.35e-01 | 78.2% | 60.8% |
| 3595789 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 43.0 | 2.56e-01 | 92.0% | 21.7% |
| 4146804 | 101.1.2.170 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_51 | 0.51 | 36.0 | 3.35e-01 | 74.7% | 76.5% |
| 3687239 | 109.4.1.563 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF3437 | 0.51 | 40.0 | 3.02e-01 | 85.1% | 90.4% |
| 3585493 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.50 | 36.0 | 3.09e-01 | 74.7% | 50.0% |
| 3721335 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.50 | 44.0 | 2.85e-01 | 100.0% | 51.3% |