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PLM4_65_coex_sep16_scaffold_0_prodigal-single.1__X__X__00326

Bact-Vir

PLM4_65_coex_sep16_scaffold_0_prodigal-single.1__X__X__00326

Identity

Kingdom:
phage

Quality

88.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-77
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5k7fA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 46.0 3.86e-01 80.5% 86.2%
3himA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.60 50.0 3.84e-01 94.8% 72.1%
3vprA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.59 47.0 3.89e-01 88.3% 86.9%
1k32A03 3.30.750.44 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › 0.57 38.0 3.96e-01 71.4% 73.6%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3991599 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.74 58.0 5.21e-01 81.8% 67.0%
None — 0.72 53.0 3.21e-01 76.6% 21.5%
2979225 507.1.1.1 ↗ alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB 0.72 49.0 3.73e-01 71.4% 30.7%
3657184 1128.1.1.0 ↗ alpha bundles › LYR protein › LYR protein › LYR protein 0.58 47.0 4.17e-01 88.3% 61.8%
3862031 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.53 48.0 3.26e-01 97.4% 49.8%