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PLM4_65_coex_sep16_scaffold_0_prodigal-single.1__X__X__00421
Bact-VirPLM4_65_coex_sep16_scaffold_0_prodigal-single.1__X__X__00421
Identity
- Kingdom:
- phage
Quality
53.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 129-176
Domain cluster:
representative
CATH (75)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pl5A03 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.78 | 71.0 | 5.18e-01 | 100.0% | 43.8% |
| 1gsoA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.75 | 59.0 | 4.21e-01 | 87.5% | 74.1% |
| 3jr7A03 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.74 | 64.0 | 4.78e-01 | 100.0% | 48.0% |
| 3fdjA03 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.73 | 63.0 | 4.66e-01 | 100.0% | 47.7% |
| 3wnzA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.73 | 57.0 | 4.07e-01 | 87.5% | 63.2% |
| 3k5iA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.72 | 58.0 | 3.83e-01 | 89.6% | 64.6% |
| 4hhvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.72 | 52.0 | 4.11e-01 | 100.0% | 36.9% |
| 2w20B01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.72 | 59.0 | 3.47e-01 | 91.7% | 21.1% |
| 4e4tA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.71 | 56.0 | 3.70e-01 | 87.5% | 44.1% |
| 1ehiA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.70 | 55.0 | 3.94e-01 | 87.5% | 72.9% |
| 4iu2B01 | 2.60.40.3810 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.70 | 51.0 | 3.89e-01 | 79.2% | 52.1% |
| 6p2kB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.70 | 52.0 | 3.13e-01 | 83.3% | 25.0% |
| 3lh4A00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.70 | 50.0 | 3.81e-01 | 77.1% | 48.7% |
| 3vpbB03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.69 | 55.0 | 4.16e-01 | 87.5% | 75.9% |
| 2qgyB01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.68 | 56.0 | 4.18e-01 | 100.0% | 41.6% |
| 2z04B03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.67 | 56.0 | 3.88e-01 | 100.0% | 83.9% |
| 1fu1A01 | 2.170.210.10 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal | 0.67 | 48.0 | 3.63e-01 | 77.1% | 32.2% |
| 3b7yA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.67 | 53.0 | 3.83e-01 | 89.6% | 73.6% |
| 3qwmA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.67 | 55.0 | 4.12e-01 | 95.8% | 40.9% |
| 3qf7A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 54.0 | 3.38e-01 | 100.0% | 15.3% |
| 3k7cA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 44.0 | 3.46e-01 | 70.8% | 32.4% |
| 3uh0A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.66 | 53.0 | 3.28e-01 | 91.7% | 33.8% |
| 2ep6A01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.65 | 53.0 | 3.99e-01 | 91.7% | 74.6% |
| 3hfqA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.65 | 57.0 | 3.44e-01 | 100.0% | 20.0% |
| 3a58A01 | 2.30.29.90 | Mainly Beta › Roll › PH-domain like › | 0.65 | 54.0 | 3.75e-01 | 95.8% | 36.8% |
| 3v98A03 | 3.10.450.60 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 49.0 | 3.71e-01 | 81.2% | 44.8% |
| 2cm5A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.65 | 52.0 | 3.78e-01 | 91.7% | 67.1% |
| 2nq3A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.65 | 53.0 | 3.92e-01 | 93.8% | 73.3% |
| 3lygA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 45.0 | 3.43e-01 | 77.1% | 31.7% |
| 4pj2A00 | 2.40.128.460 | Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme | 0.63 | 54.0 | 4.11e-01 | 100.0% | 73.6% |
| 2gdqA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.63 | 51.0 | 4.15e-01 | 100.0% | 54.2% |
| 1c8zA00 | 3.20.90.10 | Alpha Beta › Alpha-Beta Barrel › Tubby Protein; Chain A › Tubby Protein; Chain A | 0.63 | 55.0 | 3.46e-01 | 100.0% | 84.2% |
| 3nqzA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 43.0 | 3.65e-01 | 77.1% | 40.5% |
| 1ri6A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.63 | 55.0 | 3.31e-01 | 100.0% | 20.1% |
| 3jzyA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.63 | 52.0 | 3.92e-01 | 95.8% | 74.2% |
| 1whqA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.63 | 49.0 | 4.47e-01 | 100.0% | 63.4% |
| 1ffvB02 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.62 | 44.0 | 3.24e-01 | 77.1% | 26.9% |
| 5h80B03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.62 | 52.0 | 3.29e-01 | 95.8% | 91.2% |
| 4c4aA04 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.62 | 50.0 | 3.50e-01 | 91.7% | 95.0% |
| 3ijcA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.62 | 52.0 | 3.08e-01 | 93.8% | 19.0% |
| 2l55A00 | 2.40.50.320 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Copper binding periplasmic protein CusF | 0.61 | 45.0 | 3.86e-01 | 81.2% | 95.1% |
| 2f96A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.61 | 51.0 | 3.48e-01 | 100.0% | 49.8% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.61 | 42.0 | 4.30e-01 | 75.0% | 91.3% |
| 3rbyA02 | 2.40.128.310 | Mainly Beta › Beta Barrel › Lipocalin › Protein HRI1, C-terminal domain | 0.61 | 44.0 | 3.52e-01 | 75.0% | 40.0% |
| 3l9bA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.61 | 50.0 | 3.80e-01 | 95.8% | 75.4% |
| 1nbwA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.61 | 48.0 | 3.70e-01 | 97.9% | 46.2% |
| 5gu6A02 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.59 | 50.0 | 4.03e-01 | 100.0% | 83.2% |
| 1iyxA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.59 | 48.0 | 3.74e-01 | 100.0% | 90.4% |
| 8f5pE01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 48.0 | 2.80e-01 | 89.6% | 15.3% |
| 3vz9B00 | 3.30.457.50 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Chromosome segregation protein Spc25 | 0.59 | 47.0 | 3.85e-01 | 97.9% | 75.7% |
| 2yh9B00 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.58 | 40.0 | 3.69e-01 | 75.0% | 55.9% |
| 2v1lA00 | 3.10.450.430 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF2787 | 0.58 | 43.0 | 3.21e-01 | 81.2% | 38.8% |
| 1dgsA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 48.0 | 4.32e-01 | 100.0% | 72.6% |
| 1xipA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 47.0 | 2.79e-01 | 91.7% | 22.3% |
| 2ar5A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.58 | 47.0 | 3.73e-01 | 100.0% | 87.2% |
| 4wyqB00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.58 | 47.0 | 4.21e-01 | 100.0% | 65.3% |
| 5t1dB00 | 3.10.390.20 | Alpha Beta › Roll › SAND domain › Viral glycoprotein L | 0.58 | 41.0 | 3.44e-01 | 83.3% | 42.4% |
| 4dloB01 | 4.10.1240.10 | Few Secondary Structures › Irregular › Hormone receptor fold › GPCR, family 2, extracellular hormone receptor domain | 0.58 | 40.0 | 3.69e-01 | 75.0% | 57.6% |
| 3cygA01 | 3.30.565.40 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like | 0.57 | 40.0 | 3.12e-01 | 75.0% | 31.9% |
| 4xrtA02 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 38.0 | 2.78e-01 | 70.8% | 89.4% |
| 1a1aB00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.57 | 43.0 | 3.62e-01 | 95.8% | 71.6% |
| 4aefA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 47.0 | 3.86e-01 | 100.0% | 70.5% |
| 3rriA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.56 | 38.0 | 2.93e-01 | 77.1% | 27.5% |
| 4ioyX02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 44.0 | 3.58e-01 | 100.0% | 43.5% |
| 1t9hA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 40.0 | 3.50e-01 | 75.0% | 93.2% |
| 1amiA04 | 3.20.19.10 | Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 | 0.56 | 39.0 | 2.58e-01 | 81.2% | 16.3% |
| 4emoC00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 45.0 | 3.56e-01 | 97.9% | 52.6% |
| 7r97A02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 43.0 | 4.06e-01 | 100.0% | 80.9% |
| 2uvaG07 | 3.30.1120.100 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.55 | 41.0 | 3.05e-01 | 83.3% | 33.1% |
| 2mdrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 42.0 | 3.67e-01 | 100.0% | 51.1% |
| 3ednA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.53 | 39.0 | 2.85e-01 | 81.2% | 33.5% |
| 3fg8A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 37.0 | 3.02e-01 | 77.1% | 34.0% |
| 1uurA04 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.53 | 40.0 | 3.18e-01 | 97.9% | 75.9% |
| 1ym5A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.52 | 37.0 | 2.81e-01 | 85.4% | 29.1% |
| 3p0cA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.52 | 40.0 | 3.30e-01 | 100.0% | 86.5% |
ECOD (92)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5051984 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.91 | 77.0 | 5.58e-01 | 100.0% | 36.7% |
| 3629700 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.77 | 69.0 | 4.06e-01 | 97.9% | 23.3% |
| 3327654 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.76 | 63.0 | 5.48e-01 | 97.9% | 60.0% |
| 4948486 | 1001.1.1.0 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 | 0.76 | 52.0 | 5.16e-01 | 70.8% | 70.0% |
| 3321360 | 4210.1.1.1 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain › WGR | 0.75 | 63.0 | 5.45e-01 | 100.0% | 60.0% |
| 5034706 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.73 | 55.0 | 4.75e-01 | 81.2% | 69.3% |
| 4998648 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.73 | 50.0 | 4.06e-01 | 77.1% | 36.8% |
| 3671924 | 4325.1.1.12 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › AP2 | 0.73 | 54.0 | 5.72e-01 | 91.7% | 100.0% |
| 3814337 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.73 | 56.0 | 3.36e-01 | 85.4% | 23.1% |
| 2526900 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.73 | 59.0 | 3.35e-01 | 91.7% | 15.0% |
| 4023893 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.73 | 60.0 | 4.67e-01 | 100.0% | 41.8% |
| 4927915 | 206.1.3.17 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DUF1297 | 0.73 | 54.0 | 3.31e-01 | 81.2% | 38.3% |
| 3796820 | 245.1.1.0 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 | 0.72 | 53.0 | 4.34e-01 | 77.1% | 58.8% |
| 3686517 | 220.1.1.112 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_10 | 0.72 | 57.0 | 3.94e-01 | 100.0% | 26.1% |
| 3588813 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.71 | 57.0 | 3.52e-01 | 87.5% | 32.6% |
| 3997451 | 206.1.3.9 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Synapsin_C | 0.71 | 55.0 | 3.94e-01 | 87.5% | 57.2% |
| 3186199 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.71 | 61.0 | 3.75e-01 | 100.0% | 88.8% |
| 3181617 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.70 | 59.0 | 3.48e-01 | 97.9% | 17.8% |
| 3572782 | 5.1.4.147 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RMC1_N | 0.70 | 58.0 | 3.47e-01 | 97.9% | 19.2% |
| 4929323 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.69 | 60.0 | 4.63e-01 | 100.0% | 43.6% |
| 3282412 | 4312.1.1.4 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 | 0.69 | 59.0 | 4.45e-01 | 100.0% | 41.5% |
| 3801679 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.69 | 55.0 | 3.39e-01 | 91.7% | 26.1% |
| 3987365 | 896.1.1.4 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › DDE_Tnp_IS66 | 0.69 | 58.0 | 5.01e-01 | 100.0% | 62.5% |
| 3607863 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.69 | 59.0 | 4.79e-01 | 100.0% | 62.1% |
| 5077400 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.69 | 56.0 | 4.52e-01 | 97.9% | 47.1% |
| 4002261 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.68 | 54.0 | 3.09e-01 | 91.7% | 15.3% |
| 4105352 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.68 | 54.0 | 3.50e-01 | 100.0% | 23.0% |
| 2709689 | 383.1.2.1 ↗ | few secondary structure elements › Defensin-like › Defensin-related › Laterosporulin › Laterosporulin | 0.67 | 48.0 | 4.73e-01 | 77.1% | 69.8% |
| 3577495 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.67 | 55.0 | 3.62e-01 | 93.8% | 38.1% |
| 1760264 | 244.4.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › NiFeSe_Hases, PF27537 | 0.67 | 47.0 | 3.92e-01 | 79.2% | 41.4% |
| 3328359 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.67 | 58.0 | 3.90e-01 | 100.0% | 62.6% |
| 3584039 | 5.1.5.89 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PF31099 | 0.67 | 49.0 | 2.87e-01 | 83.3% | 9.6% |
| 3183690 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.67 | 57.0 | 4.02e-01 | 100.0% | 31.3% |
| 5004850 | 375.1.1.21 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 | 0.67 | 45.0 | 4.49e-01 | 77.1% | 68.0% |
| 3743240 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.67 | 48.0 | 4.14e-01 | 77.1% | 54.7% |
| 3246852 | 3195.1.1.1 ↗ | extended segments › Mediator of RNA polymerase II transcription subunit 6 › Mediator of RNA polymerase II transcription subunit 6 › Mediator of RNA polymerase II transcription subunit 6 › Med6 | 0.66 | 52.0 | 3.68e-01 | 85.4% | 29.0% |
| 3474038 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.66 | 50.0 | 3.62e-01 | 83.3% | 30.7% |
| 4943345 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 46.0 | 3.74e-01 | 79.2% | 37.0% |
| 3598139 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.65 | 53.0 | 3.86e-01 | 100.0% | 30.7% |
| 3472961 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.65 | 53.0 | 3.88e-01 | 100.0% | 31.3% |
| 1390080 | 220.1.1.32 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind | 0.65 | 54.0 | 3.70e-01 | 95.8% | 34.6% |
| 3622767 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.65 | 54.0 | 4.48e-01 | 100.0% | 72.6% |
| 4994410 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 53.0 | 4.56e-01 | 100.0% | 55.3% |
| 3227789 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 55.0 | 3.31e-01 | 100.0% | 14.6% |
| 3990341 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.64 | 54.0 | 4.20e-01 | 93.8% | 66.7% |
| 5054861 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.64 | 53.0 | 3.13e-01 | 97.9% | 10.1% |
| 3246345 | 5.1.4.341 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_2nd | 0.64 | 55.0 | 3.39e-01 | 97.9% | 16.7% |
| 4451022 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.64 | 53.0 | 4.12e-01 | 100.0% | 40.0% |
| 5074262 | 2484.1.1.22 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF99 | 0.64 | 54.0 | 3.73e-01 | 100.0% | 31.7% |
| 3802153 | 868.1.1.11 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › DUF7903 | 0.64 | 56.0 | 3.54e-01 | 97.9% | 36.7% |
| 5060723 | 5.1.9.3 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › Propeller domain in ABC toxin B component › FG-GAP_3 | 0.64 | 54.0 | 3.21e-01 | 100.0% | 20.0% |
| 3223154 | 220.1.1.176 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7778 | 0.64 | 53.0 | 3.95e-01 | 100.0% | 34.3% |
| 4958552 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 54.0 | 4.13e-01 | 100.0% | 43.5% |
| 5041112 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.62 | 46.0 | 4.19e-01 | 91.7% | 57.1% |
| 3247792 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.62 | 50.0 | 3.95e-01 | 100.0% | 75.8% |
| 3466098 | 5.1.4.101 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF1618 | 0.62 | 52.0 | 3.23e-01 | 100.0% | 20.0% |
| 4346988 | 214.1.1.6 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2_2 | 0.62 | 49.0 | 4.04e-01 | 100.0% | 64.8% |
| 3386302 | 3186.1.1.1 ↗ | a+b two layers › C-terminal domain of FliK › C-terminal domain of FliK › C-terminal domain of FliK › Flg_hook | 0.62 | 42.0 | 3.61e-01 | 75.0% | 41.2% |
| 3181024 | 719.1.1.2 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF | 0.61 | 43.0 | 3.21e-01 | 81.2% | 27.7% |
| 3801624 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.61 | 47.0 | 3.92e-01 | 100.0% | 45.0% |
| 3408936 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.61 | 47.0 | 4.00e-01 | 100.0% | 48.9% |
| 3672898 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.61 | 50.0 | 3.85e-01 | 100.0% | 80.8% |
| 3797649 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.61 | 49.0 | 3.95e-01 | 100.0% | 47.3% |
| 3436093 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.60 | 50.0 | 4.45e-01 | 100.0% | 76.0% |
| 3941717 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.60 | 43.0 | 3.60e-01 | 85.4% | 43.2% |
| 3797648 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.60 | 48.0 | 4.13e-01 | 100.0% | 54.1% |
| 3616389 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.60 | 49.0 | 4.29e-01 | 100.0% | 68.8% |
| 3831854 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.59 | 48.0 | 4.29e-01 | 97.9% | 78.7% |
| 5039031 | 220.1.1.76 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 | 0.59 | 46.0 | 3.81e-01 | 100.0% | 45.5% |
| 2740084 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.59 | 46.0 | 3.79e-01 | 100.0% | 55.5% |
| 4948090 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.58 | 46.0 | 3.48e-01 | 100.0% | 33.3% |
| 3819047 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.58 | 49.0 | 3.64e-01 | 100.0% | 41.4% |
| 3226466 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.58 | 45.0 | 3.54e-01 | 100.0% | 46.2% |
| 4941435 | 11.1.1.39 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_1 | 0.58 | 47.0 | 3.89e-01 | 100.0% | 80.0% |
| 4960238 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 39.0 | 3.91e-01 | 77.1% | 70.0% |
| 3575222 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.57 | 39.0 | 3.78e-01 | 75.0% | 60.0% |
| 4379266 | 316.1.1.1 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol | 0.57 | 39.0 | 2.81e-01 | 75.0% | 21.8% |
| 3476540 | 4099.1.1.2 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spindle_Spc25 | 0.55 | 41.0 | 3.33e-01 | 93.8% | 74.2% |
| 4463884 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.55 | 42.0 | 3.46e-01 | 100.0% | 48.7% |
| 3396324 | 295.1.1.4 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain | 0.55 | 42.0 | 4.00e-01 | 97.9% | 84.6% |
| 4942959 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.55 | 39.0 | 2.65e-01 | 81.2% | 18.8% |
| 4002646 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 41.0 | 2.70e-01 | 91.7% | 37.7% |
| 4947486 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 42.0 | 3.29e-01 | 100.0% | 38.5% |
| 3177659 | 5.1.4.307 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF29630 | 0.53 | 39.0 | 2.39e-01 | 91.7% | 20.8% |
| 3655146 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.53 | 36.0 | 3.05e-01 | 75.0% | 36.8% |
| 3563026 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.53 | 41.0 | 3.28e-01 | 100.0% | 41.5% |
| 3943172 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.53 | 39.0 | 3.20e-01 | 83.3% | 91.0% |
| 170035 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.53 | 37.0 | 3.10e-01 | 77.1% | 37.1% |
| 4962461 | 300.1.1.24 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › DICT | 0.52 | 42.0 | 3.04e-01 | 95.8% | 31.9% |
| 3327373 | 300.1.1.1 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc | 0.52 | 41.0 | 3.20e-01 | 100.0% | 88.9% |
| 3977382 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.52 | 36.0 | 3.01e-01 | 75.0% | 81.1% |
| 4040354 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.51 | 40.0 | 3.64e-01 | 100.0% | 65.3% |
D2
medium
residues 1-77