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PLM4_65_coex_sep16_scaffold_0_prodigal-single.1__X__X__00436
Bact-VirPLM4_65_coex_sep16_scaffold_0_prodigal-single.1__X__X__00436
Identity
- Kingdom:
- phage
Quality
82.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 42-139
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 45.0 | 5.17e-01 | 100.0% | 75.3% |
| 5i4eA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.80 | 36.0 | 5.19e-01 | 80.6% | 93.5% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 41.0 | 5.00e-01 | 93.9% | 78.1% |
| 4kbmB01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.78 | 44.0 | 5.71e-01 | 93.9% | 100.0% |
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 39.0 | 5.13e-01 | 90.8% | 87.5% |
| 4h75A00 | 2.80.10.70 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty | 0.76 | 51.0 | 3.95e-01 | 99.0% | 33.7% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.73 | 46.0 | 5.12e-01 | 94.9% | 82.7% |
| 3ntkA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 40.0 | 4.44e-01 | 100.0% | 67.5% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 46.0 | 5.33e-01 | 98.0% | 95.8% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 39.0 | 4.33e-01 | 90.8% | 73.4% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 38.0 | 4.70e-01 | 89.8% | 91.9% |
| 1vwxT01 | 2.30.30.70 | Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 | 0.62 | 44.0 | 4.50e-01 | 100.0% | 74.2% |
| 7u32F02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.62 | 34.0 | 4.36e-01 | 91.8% | 100.0% |
| 3i35A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 36.0 | 4.52e-01 | 88.8% | 100.0% |
| 5z8lA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.59 | 47.0 | 4.39e-01 | 100.0% | 68.9% |
| 7cceA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.59 | 48.0 | 4.09e-01 | 100.0% | 56.3% |
| 1k1zA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 38.0 | 4.19e-01 | 89.8% | 85.9% |
| 2lydA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 44.0 | 3.96e-01 | 92.9% | 61.9% |
| 2codA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 37.0 | 3.77e-01 | 95.9% | 77.1% |
| 1ylnA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 37.0 | 3.51e-01 | 80.6% | 64.9% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3492757 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.84 | 53.0 | 6.20e-01 | 100.0% | 90.0% |
| 3628131 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.80 | 46.0 | 4.59e-01 | 100.0% | 56.0% |
| 4949773 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.77 | 47.0 | 4.03e-01 | 100.0% | 41.4% |
| 3774692 | 4.1.1.31 ↗ | beta barrels › SH3 › SH3 › SH3 › Spin-Ssty | 0.75 | 50.0 | 5.49e-01 | 100.0% | 83.7% |
| 3500542 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.73 | 43.0 | 4.54e-01 | 100.0% | 64.4% |
| 1112010 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.73 | 46.0 | 5.12e-01 | 94.9% | 82.7% |
| 3392130 | 4.1.1.223 ↗ | beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st | 0.72 | 45.0 | 5.41e-01 | 95.9% | 95.4% |
| 3954938 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 44.0 | 5.29e-01 | 100.0% | 93.8% |
| 3511551 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 43.0 | 5.33e-01 | 100.0% | 100.0% |
| 3845351 | 4.1.1.31 ↗ | beta barrels › SH3 › SH3 › SH3 › Spin-Ssty | 0.70 | 48.0 | 5.03e-01 | 98.0% | 76.7% |
| 3241067 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 46.0 | 4.47e-01 | 100.0% | 60.0% |
| 3749245 | 4.1.1.31 ↗ | beta barrels › SH3 › SH3 › SH3 › Spin-Ssty | 0.70 | 48.0 | 4.34e-01 | 98.0% | 53.1% |
| 3913637 | 4.1.1.31 ↗ | beta barrels › SH3 › SH3 › SH3 › Spin-Ssty | 0.70 | 47.0 | 4.90e-01 | 99.0% | 75.6% |
| 3457163 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.69 | 44.0 | 4.80e-01 | 99.0% | 78.8% |
| 3226827 | 4.1.1.133 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_YG-box | 0.69 | 45.0 | 4.46e-01 | 100.0% | 62.9% |
| 3834563 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.68 | 44.0 | 4.80e-01 | 94.9% | 80.0% |
| 3826751 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.67 | 44.0 | 4.87e-01 | 96.9% | 82.5% |
| 3717986 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.63 | 45.0 | 4.29e-01 | 100.0% | 63.5% |
| 5032977 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 42.0 | 4.60e-01 | 99.0% | 87.5% |
| 3608011 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 45.0 | 4.23e-01 | 100.0% | 67.5% |
| 4405445 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.56 | 35.0 | 4.04e-01 | 88.8% | 90.0% |