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PLM4_65_coex_sep16_scaffold_0_prodigal-single.1__X__X__00605
Bact-VirPLM4_65_coex_sep16_scaffold_0_prodigal-single.1__X__X__00605
Identity
- Kingdom:
- phage
Quality
70.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-53
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yf4F00 | 1.10.3420.10 | Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain | 0.69 | 57.0 | 4.07e-01 | 96.2% | 32.9% |
| 2fswA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 40.0 | 3.36e-01 | 71.2% | 77.5% |
| 4hreA03 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.57 | 43.0 | 3.78e-01 | 88.5% | 93.1% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3533614 | 7515.1.1.4 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase,Sulfatase_C | 0.79 | 64.0 | 3.60e-01 | 94.2% | 8.1% |
| 3683114 | 5039.1.1.9 ↗ | alpha bundles › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › DUF4220 | 0.73 | 59.0 | 3.76e-01 | 88.5% | 20.0% |
| 1675309 | 601.51.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-helical domain in phase 1 flagellin › alpha-helical domain in phase 1 flagellin › Flagellin_N | 0.70 | 57.0 | 4.56e-01 | 88.5% | 46.0% |
| 3965185 | 633.2.1.0 ↗ | alpha bundles › Bromodomain-like › Carnobacteriocin B2 immunity protein › Carnobacteriocin B2 immunity protein | 0.69 | 48.0 | 4.40e-01 | 76.9% | 55.7% |
| 4053331 | 601.25.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › TrmE connector domain › TrmE connector domain › MnmE_helical | 0.64 | 53.0 | 3.36e-01 | 98.1% | 87.0% |