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PP003747.1__WQZ49492.1__Z3_176__00176
Bact-VirPP003747.1__WQZ49492.1__Z3_176__00176
Identity
- Accession:
- PP003747 ↗
- Kingdom:
- phage
Quality
92.6
mean pLDDT
Taxonomy
TaxID: 3110481
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-70
Domain cluster:
rep: MF288920.1__ASR79206.1__ZAINNY_110__00110__D6-67
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ynqB00 | 1.25.40.680 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type VII secretion system EssB, C-terminal-like domain | 0.73 | 46.0 | 3.51e-01 | 100.0% | 29.1% |
| 1iuqA01 | 1.10.1200.50 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Glycerol-3-phosphate acyltransferase, alpha helical bundle, N-terminal | 0.68 | 42.0 | 4.08e-01 | 94.2% | 56.6% |
| 3lcvB01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.62 | 35.0 | 3.76e-01 | 76.8% | 64.9% |
| 3dpjF00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.61 | 49.0 | 3.66e-01 | 94.2% | 33.5% |
| 2dbgA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.58 | 43.0 | 3.87e-01 | 81.2% | 81.6% |
| 1a04A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 44.0 | 4.25e-01 | 85.5% | 72.5% |
| 3f1bA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 49.0 | 3.65e-01 | 95.7% | 38.3% |
| 3otnA00 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.55 | 47.0 | 2.90e-01 | 100.0% | 57.7% |
| 2ktmA00 | 1.10.790.10 | Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain | 0.54 | 45.0 | 4.57e-01 | 98.6% | 94.1% |
| 6qpqB00 | 1.10.10.580 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E | 0.54 | 43.0 | 4.09e-01 | 91.3% | 72.8% |
| 3s5rB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 43.0 | 3.25e-01 | 94.2% | 40.3% |
| 1nv8B01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.53 | 36.0 | 3.58e-01 | 91.3% | 67.6% |
| 2do9A01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.52 | 37.0 | 3.51e-01 | 75.4% | 90.5% |
| 1h2tC03 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 45.0 | 3.06e-01 | 92.8% | 40.9% |
| 7eqeB01 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 43.0 | 3.36e-01 | 97.1% | 51.5% |
| 2l22A01 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.51 | 35.0 | 3.26e-01 | 72.5% | 67.0% |
| 4f03B02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 44.0 | 3.51e-01 | 98.6% | 50.3% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4962469 | 101.1.2.925 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7344 | 0.66 | 50.0 | 3.76e-01 | 100.0% | 34.4% |
| 4964783 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.66 | 54.0 | 3.95e-01 | 87.0% | 83.5% |
| 4093017 | 4973.1.1.1 ↗ | alpha bundles › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › DnaB_bind | 0.66 | 42.0 | 4.12e-01 | 95.7% | 60.0% |
| 3720299 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 60.0 | 5.45e-01 | 100.0% | 95.6% |
| 3437734 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.65 | 42.0 | 4.32e-01 | 94.2% | 69.2% |
| 4997208 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.64 | 47.0 | 3.10e-01 | 78.3% | 80.3% |
| 3253225 | 130.1.1.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP | 0.61 | 51.0 | 4.81e-01 | 100.0% | 76.5% |
| 4506167 | 613.1.1.1 ↗ | alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › tRNA-synt_2c | 0.58 | 44.0 | 3.02e-01 | 81.2% | 38.3% |
| 4468502 | 192.11.1.1 ↗ | alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB › UVR | 0.56 | 36.0 | 3.79e-01 | 89.9% | 75.0% |
| 3388407 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.55 | 48.0 | 3.16e-01 | 98.6% | 90.6% |
| 3941718 | 185.1.2.0 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Protein HNS-dependent expression A HdeA | 0.55 | 38.0 | 3.89e-01 | 85.5% | 74.3% |
| 3199629 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.55 | 37.0 | 4.12e-01 | 84.1% | 96.0% |
| 3685214 | 632.18.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 | 0.55 | 46.0 | 4.30e-01 | 91.3% | 82.4% |
| 4386562 | 110.1.1.28 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › Dredd_2nd | 0.53 | 38.0 | 3.44e-01 | 75.4% | 92.6% |
| 4194924 | 3018.1.1.0 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like | 0.53 | 42.0 | 4.00e-01 | 89.9% | 81.2% |
| 4594328 | 181.1.1.2 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › FlhF_N | 0.53 | 39.0 | 3.80e-01 | 88.4% | 72.0% |
| 5054184 | 3273.1.1.0 ↗ | alpha arrays › Filamentous archaeal viruses coat proteins › Filamentous archaeal viruses coat proteins › Filamentous archaeal viruses coat proteins | 0.53 | 44.0 | 3.88e-01 | 100.0% | 61.8% |
| 4964800 | 101.1.2.925 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7344 | 0.52 | 41.0 | 3.61e-01 | 89.9% | 58.1% |
| 4962468 | 101.1.2.925 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7344 | 0.51 | 42.0 | 3.73e-01 | 95.7% | 61.9% |