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PP034387.1__WRW34146.1__CF1_0114__00114
Bact-VirPP034387.1__WRW34146.1__CF1_0114__00114
Identity
- Accession:
- PP034387 ↗
- Kingdom:
- phage
Quality
65.0
mean pLDDT
Taxonomy
TaxID: 3113738
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 116-208
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mynA00 | 3.30.30.10 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › Knottin, scorpion toxin-like | 0.60 | 23.0 | 3.19e-01 | 90.3% | 68.2% |
| 5ajiB02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 31.0 | 3.96e-01 | 89.2% | 100.0% |
| 2uz8A01 | 3.40.30.90 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › | 0.56 | 31.0 | 3.87e-01 | 90.3% | 92.6% |
| 1pmtA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 39.0 | 3.93e-01 | 94.6% | 72.3% |
| 4hcsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 30.0 | 3.43e-01 | 73.1% | 71.6% |
| 5tj3A02 | 3.30.1360.150 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.55 | 33.0 | 3.17e-01 | 87.1% | 47.8% |
| 2ra2B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 33.0 | 4.14e-01 | 80.6% | 98.3% |
| 4bl7A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 35.0 | 3.45e-01 | 91.4% | 59.2% |
| 4qozC00 | 1.10.8.1120 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Histone RNA hairpin-binding protein RNA-binding domain | 0.54 | 33.0 | 3.62e-01 | 94.6% | 76.7% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.54 | 29.0 | 3.74e-01 | 82.8% | 100.0% |
| 2mp1A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 32.0 | 3.44e-01 | 77.4% | 68.8% |
| 1icwB00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 31.0 | 3.51e-01 | 76.3% | 78.8% |
| 5jrjA02 | 3.30.250.10 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › RecA protein, C-terminal domain | 0.53 | 33.0 | 3.94e-01 | 96.8% | 100.0% |
| 2fwrA01 | 3.40.1170.30 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › | 0.53 | 30.0 | 3.66e-01 | 79.6% | 91.2% |
| 6tuaA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.53 | 39.0 | 3.20e-01 | 80.6% | 88.5% |
| 2ra9A02 | 2.30.270.10 | Mainly Beta › Roll › duf1285 protein fold › duf1285 protein | 0.51 | 27.0 | 2.92e-01 | 79.6% | 57.5% |
| 1z7uB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 37.0 | 3.57e-01 | 78.5% | 73.6% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3190184 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.62 | 33.0 | 3.31e-01 | 77.4% | 48.4% |
| 3691749 | 2487.1.1.8 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › RraA-like | 0.57 | 48.0 | 3.62e-01 | 93.5% | 87.7% |
| 3911547 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.56 | 34.0 | 3.53e-01 | 77.4% | 64.7% |
| 3417244 | 220.1.1.64 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C1_MyoVII | 0.54 | 31.0 | 3.15e-01 | 78.5% | 53.7% |
| 3256843 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.53 | 32.0 | 3.16e-01 | 80.6% | 53.3% |
| 5073015 | 2485.1.1.15 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredox_DsbH | 0.52 | 36.0 | 3.30e-01 | 90.3% | 51.5% |
| 3829446 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.52 | 39.0 | 2.75e-01 | 81.7% | 48.9% |
| 3720028 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 31.0 | 2.97e-01 | 90.3% | 47.8% |
D2
medium
residues 16-73