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PP034390.1__WRW34724.1__CF5_0167__00167

Bact-Vir

PP034390.1__WRW34724.1__CF5_0167__00167

Identity

Accession:
PP034390 ↗
Kingdom:
phage

Quality

90.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-97
PDB
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3sjqC00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.88 48.0 5.29e-01 99.0% 66.3%
4aflA00 6.10.140.1740 Special › Helix non-globular › Helix Hairpins › 0.78 52.0 5.13e-01 100.0% 64.7%
1zkeA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.71 49.0 5.26e-01 100.0% 85.2%
2g0iA00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.70 54.0 5.17e-01 96.9% 71.2%
3rkxA02 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.67 53.0 4.15e-01 84.5% 56.0%
1dxrL02 1.20.85.10 Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like 0.65 48.0 4.67e-01 100.0% 69.4%
5iduC03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.63 57.0 4.86e-01 100.0% 83.6%
1kcgC00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.63 55.0 4.59e-01 96.9% 62.9%
3eeaA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.62 55.0 4.73e-01 99.0% 100.0%
7zxkC01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.61 51.0 4.36e-01 89.7% 74.7%
1zt4C01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.59 51.0 4.32e-01 100.0% 62.0%
1lqvB00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.59 52.0 4.39e-01 100.0% 66.5%
4hs5A00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.59 46.0 4.49e-01 83.5% 100.0%
3dzzA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.59 41.0 3.67e-01 73.2% 97.9%
3l9rA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.59 50.0 4.27e-01 100.0% 60.6%
3dodB01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.58 39.0 3.33e-01 70.1% 61.9%
4jpdA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.58 46.0 4.48e-01 87.6% 99.1%
2od0A00 3.30.1460.30 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › YgaC/TfoX-N like chaperone 0.58 39.0 3.88e-01 70.1% 90.3%
3fi9A02 3.90.110.10 Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal 0.57 44.0 3.63e-01 82.5% 79.2%
2r55A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 45.0 3.60e-01 87.6% 68.8%
2o5nA02 3.30.500.30 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.56 47.0 4.06e-01 92.8% 61.8%
3madA02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 39.0 3.59e-01 73.2% 76.3%
2zzeA04 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.56 47.0 4.78e-01 91.8% 100.0%
1hyrC01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.55 46.0 3.90e-01 95.9% 63.3%
1lc5A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.55 38.0 3.55e-01 71.1% 76.0%
4xrtA02 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 47.0 4.07e-01 96.9% 90.6%
3ovcA01 3.30.200.150 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.54 34.0 3.74e-01 72.2% 83.1%
1pqzA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.54 43.0 3.81e-01 96.9% 59.9%
1sb7A02 3.30.2340.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › TruD, insertion domain 0.54 47.0 4.27e-01 99.0% 80.9%
4p4mA02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.54 43.0 4.11e-01 87.6% 94.8%
3qszA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 44.0 3.73e-01 93.8% 79.1%
2wm1A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.53 42.0 2.90e-01 84.5% 30.1%
3dtyB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.53 39.0 3.25e-01 79.4% 50.3%
2q7eA02 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.53 44.0 3.42e-01 90.7% 98.6%
3gjyA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 42.0 3.09e-01 86.6% 62.0%
2gzaA01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.53 34.0 3.32e-01 86.6% 58.3%
1fg7A02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.52 41.0 3.69e-01 82.5% 68.2%
3uh9B00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.52 38.0 3.46e-01 78.4% 75.2%
7aalA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.52 48.0 3.42e-01 100.0% 38.3%
4z04A00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.51 41.0 3.82e-01 88.7% 83.9%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3802135 192.29.1.27 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF1218 0.76 45.0 3.75e-01 100.0% 35.2%
4979850 314.1.1.0 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases 0.72 50.0 3.56e-01 72.2% 52.7%
3229069 633.23.1.5 alpha bundles › Bromodomain-like › Claudin › Claudin › Clc-like 0.66 60.0 4.63e-01 100.0% 96.7%
4251515 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.63 58.0 4.07e-01 100.0% 35.1%
3520998 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.63 56.0 4.57e-01 99.0% 95.0%
142797 233.1.1.6 a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I_3 0.63 55.0 4.57e-01 100.0% 60.1%
4998236 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.61 45.0 2.95e-01 88.7% 16.7%
3378755 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.60 51.0 4.66e-01 90.7% 90.4%
4965319 241.11.1.3 a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like › Luciferase 0.60 44.0 3.93e-01 76.3% 93.3%
4978893 3755.3.1.632 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Prefoldin 0.60 55.0 4.72e-01 100.0% 65.7%
3915599 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 34.0 2.88e-01 74.2% 34.2%
3598725 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.60 53.0 4.30e-01 100.0% 85.2%
3787121 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.59 46.0 4.26e-01 83.5% 64.0%
5029396 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.59 54.0 5.02e-01 100.0% 80.0%
4879078 233.1.1.6 a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I_3 0.59 50.0 4.24e-01 100.0% 59.8%
3329453 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.58 53.0 4.54e-01 100.0% 63.4%
5022380 3755.3.1.632 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Prefoldin 0.58 53.0 4.56e-01 100.0% 65.7%
3631990 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.58 48.0 4.07e-01 90.7% 67.9%
4303742 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.58 53.0 4.85e-01 100.0% 76.7%
4973468 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.58 53.0 4.54e-01 100.0% 65.7%
5064664 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.58 53.0 4.85e-01 100.0% 76.7%
4971920 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.58 53.0 4.76e-01 100.0% 73.6%
3259661 331.23.1.9 a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › RnlA_toxin 0.58 40.0 4.46e-01 78.4% 98.6%
5040546 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.58 53.0 4.39e-01 100.0% 60.1%
3593624 633.23.1.23 alpha bundles › Bromodomain-like › Claudin › Claudin › Amastin 0.58 53.0 4.09e-01 100.0% 48.5%
5074454 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.57 52.0 4.81e-01 100.0% 76.7%
5056505 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.57 52.0 4.90e-01 100.0% 80.0%
5038348 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.57 52.0 4.49e-01 100.0% 65.7%
4403516 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.57 52.0 4.71e-01 100.0% 74.2%
5027984 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.57 55.0 5.02e-01 100.0% 88.3%
4626792 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.57 52.0 4.41e-01 100.0% 63.4%
4967223 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.57 51.0 4.54e-01 100.0% 69.2%
4996551 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.57 54.0 4.68e-01 100.0% 75.7%
4941487 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.57 52.0 4.75e-01 100.0% 76.7%
4485921 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.57 51.0 4.73e-01 100.0% 76.7%
4969864 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.56 51.0 4.57e-01 100.0% 70.8%
4942428 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.56 51.0 4.49e-01 100.0% 68.1%
4994900 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.56 51.0 4.63e-01 100.0% 73.6%
5048161 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.56 54.0 4.66e-01 100.0% 85.7%
3398317 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.56 51.0 4.20e-01 100.0% 57.5%
4661346 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.56 54.0 4.58e-01 100.0% 73.1%
3489283 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.56 52.0 4.53e-01 100.0% 68.9%
4532543 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.56 54.0 4.62e-01 100.0% 75.7%
3932006 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.56 53.0 4.98e-01 100.0% 92.2%
4985469 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.56 51.0 4.47e-01 100.0% 68.7%
5066236 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.56 53.0 4.54e-01 100.0% 82.8%
4168471 4207.1.1.1 alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) › Med21 0.56 53.0 4.42e-01 100.0% 63.2%
4281419 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.56 53.0 4.60e-01 100.0% 76.8%
5079975 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.55 53.0 4.50e-01 100.0% 73.1%
3599620 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.55 50.0 4.69e-01 100.0% 80.0%
6599 233.1.1.0 a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain 0.55 38.0 3.49e-01 100.0% 54.8%
3491256 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.55 50.0 3.97e-01 100.0% 52.6%
3390284 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.55 50.0 4.17e-01 100.0% 60.1%
4936526 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.55 52.0 4.51e-01 100.0% 69.6%
4338928 233.1.1.6 a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I_3 0.54 36.0 3.79e-01 71.1% 74.4%
3594109 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.54 51.0 4.30e-01 100.0% 66.0%
3277795 241.11.1.1 a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like › YjbR 0.52 41.0 3.66e-01 82.5% 71.1%
4974000 243.6.1.0 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.52 30.0 3.53e-01 72.2% 83.1%
3173926 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.52 49.0 3.88e-01 100.0% 65.6%
4551329 3518.1.1.1 a+b two layers › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › FMN_bind 0.52 44.0 3.95e-01 95.9% 84.3%
3210826 2485.1.1.67 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GILT 0.51 37.0 2.90e-01 77.3% 35.5%
3254787 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 41.0 3.68e-01 87.6% 78.5%
4990636 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.51 46.0 4.14e-01 100.0% 73.8%