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PP034390.1__WRW34728.1__CF5_0018__00018
Bact-VirPP034390.1__WRW34728.1__CF5_0018__00018
Identity
- Accession:
- PP034390 ↗
- Kingdom:
- phage
Quality
71.4
mean pLDDT
Taxonomy
TaxID: 3113739
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-91
Domain cluster:
representative
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1bvsA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 35.0 | 4.09e-01 | 73.3% | 72.3% |
| 6bogA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 36.0 | 4.50e-01 | 87.8% | 96.2% |
| 4g54A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.62 | 38.0 | 3.47e-01 | 91.1% | 44.0% |
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 39.0 | 4.69e-01 | 90.0% | 98.3% |
| 7afrX02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.61 | 39.0 | 4.56e-01 | 84.4% | 96.7% |
| 5i4eA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.60 | 31.0 | 4.18e-01 | 75.6% | 97.8% |
| 1ex4B02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.60 | 32.0 | 3.92e-01 | 78.9% | 81.4% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 33.0 | 3.68e-01 | 85.6% | 67.1% |
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 36.0 | 4.22e-01 | 87.8% | 87.3% |
| 2e70A00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 35.0 | 3.88e-01 | 88.9% | 74.6% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.59 | 32.0 | 4.00e-01 | 76.7% | 90.4% |
| 2do3A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 31.0 | 4.02e-01 | 82.2% | 92.2% |
| 1ei5A02 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.58 | 42.0 | 4.39e-01 | 97.8% | 84.1% |
| 2vb6A01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.58 | 31.0 | 3.87e-01 | 74.4% | 87.0% |
| 4ytlA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 31.0 | 4.04e-01 | 83.3% | 96.0% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 32.0 | 3.76e-01 | 81.1% | 78.1% |
| 2k4yA00 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.57 | 39.0 | 4.07e-01 | 85.6% | 74.4% |
| 3goxA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 32.0 | 4.06e-01 | 82.2% | 96.1% |
| 3gd0A02 | 3.30.920.50 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain | 0.57 | 45.0 | 4.25e-01 | 86.7% | 87.5% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.57 | 31.0 | 4.03e-01 | 76.7% | 97.9% |
| 2k5fA01 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.57 | 40.0 | 4.21e-01 | 84.4% | 79.5% |
| 3h8zA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 31.0 | 4.05e-01 | 84.4% | 100.0% |
| 4fw1A02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.57 | 31.0 | 3.87e-01 | 74.4% | 88.9% |
| 1e5pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 49.0 | 4.16e-01 | 96.7% | 66.4% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 30.0 | 3.97e-01 | 70.0% | 100.0% |
| 1ts9A00 | 2.30.30.210 | Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 | 0.56 | 39.0 | 3.81e-01 | 72.2% | 90.8% |
| 3e1sA04 | 2.30.30.940 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 38.0 | 4.26e-01 | 90.0% | 92.8% |
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.55 | 33.0 | 3.84e-01 | 70.0% | 81.8% |
| 1jqpA01 | 2.40.128.80 | Mainly Beta › Beta Barrel › Lipocalin › Cathepsin C, exclusion domain | 0.55 | 46.0 | 4.33e-01 | 95.6% | 90.2% |
| 7szeB02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.55 | 39.0 | 3.22e-01 | 77.8% | 75.0% |
| 3hrsA02 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.55 | 38.0 | 4.15e-01 | 84.4% | 86.8% |
| 4u3qB00 | 2.40.128.640 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 44.0 | 4.34e-01 | 96.7% | 83.8% |
| 3f79E00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.53 | 38.0 | 2.83e-01 | 96.7% | 28.8% |
| 3vasA01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.53 | 47.0 | 3.34e-01 | 100.0% | 61.7% |
| 4adiA01 | 2.60.98.30 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Rubella membrane glycoprotein E1, domain 1 | 0.52 | 39.0 | 4.24e-01 | 88.9% | 92.2% |
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 31.0 | 3.71e-01 | 77.8% | 91.5% |
| 3otxB01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 46.0 | 3.29e-01 | 100.0% | 93.2% |
| 4wsfA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 40.0 | 3.75e-01 | 85.6% | 68.5% |
| 2arzA02 | 3.20.180.10 | Alpha Beta › Alpha-Beta Barrel › Split barrel-like › PNP-oxidase-like | 0.51 | 43.0 | 4.40e-01 | 95.6% | 96.6% |
| 4w1vA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 44.0 | 3.72e-01 | 98.9% | 82.3% |
| 3asiA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 41.0 | 3.33e-01 | 90.0% | 68.0% |
| 6l6jA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 35.0 | 3.12e-01 | 73.3% | 97.8% |
| 2jrbA00 | 3.30.250.20 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › L1 transposable element, C-terminal domain | 0.51 | 32.0 | 3.51e-01 | 100.0% | 86.2% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5035483 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.70 | 34.0 | 2.74e-01 | 91.1% | 24.1% |
| 4990212 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 37.0 | 4.54e-01 | 85.6% | 85.5% |
| 4975150 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 38.0 | 4.54e-01 | 88.9% | 86.7% |
| 4332042 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 44.0 | 4.87e-01 | 90.0% | 88.6% |
| 5033075 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 37.0 | 4.57e-01 | 88.9% | 92.7% |
| 4980648 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 41.0 | 4.59e-01 | 88.9% | 84.3% |
| 4996195 | 304.39.1.6 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_2nd | 0.63 | 38.0 | 4.46e-01 | 88.9% | 88.3% |
| 3577864 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.63 | 34.0 | 3.52e-01 | 82.2% | 55.3% |
| 3711384 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 43.0 | 4.45e-01 | 90.0% | 75.3% |
| 5035934 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.62 | 41.0 | 4.66e-01 | 88.9% | 93.8% |
| 4930469 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.62 | 29.0 | 4.17e-01 | 71.1% | 100.0% |
| 4128954 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.62 | 37.0 | 4.14e-01 | 73.3% | 75.7% |
| 4627519 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 29.0 | 4.13e-01 | 73.3% | 100.0% |
| 3765274 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 38.0 | 3.81e-01 | 87.8% | 61.1% |
| 4929056 | 3794.1.1.0 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit | 0.62 | 39.0 | 4.15e-01 | 86.7% | 72.5% |
| 4963446 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 41.0 | 4.65e-01 | 86.7% | 93.8% |
| 4015071 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 39.0 | 4.40e-01 | 88.9% | 84.3% |
| 4973749 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 40.0 | 4.49e-01 | 84.4% | 85.7% |
| 4930861 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.61 | 40.0 | 4.52e-01 | 88.9% | 93.8% |
| 4011604 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.60 | 41.0 | 4.45e-01 | 88.9% | 84.0% |
| 3998022 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.60 | 32.0 | 3.90e-01 | 81.1% | 81.8% |
| 4863023 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.60 | 33.0 | 4.32e-01 | 84.4% | 100.0% |
| 3546607 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.60 | 32.0 | 4.10e-01 | 76.7% | 92.0% |
| 4499953 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.60 | 37.0 | 4.32e-01 | 84.4% | 91.7% |
| 3590315 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.60 | 41.0 | 4.49e-01 | 84.4% | 85.3% |
| 4890270 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.59 | 32.0 | 4.05e-01 | 74.4% | 90.7% |
| 5054597 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.59 | 40.0 | 4.43e-01 | 84.4% | 85.3% |
| 3261235 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.59 | 35.0 | 3.63e-01 | 84.4% | 62.4% |
| 3570399 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 39.0 | 4.45e-01 | 91.1% | 93.8% |
| 5018743 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.58 | 40.0 | 4.40e-01 | 84.4% | 85.3% |
| 2575643 | 4.1.1.8 ↗ | beta barrels › SH3 › SH3 › SH3 › IN_DBD_C | 0.58 | 33.0 | 3.72e-01 | 72.2% | 73.9% |
| 5012053 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.57 | 40.0 | 4.46e-01 | 86.7% | 89.2% |
| 3671986 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.57 | 34.0 | 3.83e-01 | 88.9% | 77.1% |
| 3840679 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.57 | 33.0 | 3.26e-01 | 81.1% | 53.7% |
| 3622846 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.57 | 31.0 | 3.93e-01 | 78.9% | 94.0% |
| 5041872 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.57 | 40.0 | 4.41e-01 | 84.4% | 88.0% |
| 3721794 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 31.0 | 3.77e-01 | 78.9% | 81.7% |
| 4962256 | 101.1.2.937 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF25943 | 0.57 | 46.0 | 4.39e-01 | 91.1% | 95.5% |
| 3929784 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 31.0 | 4.05e-01 | 74.4% | 98.0% |
| 4024124 | 148.1.3.40 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ORC5_lid | 0.56 | 49.0 | 4.20e-01 | 100.0% | 68.0% |
| 3883159 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.56 | 33.0 | 3.37e-01 | 84.4% | 58.9% |
| 4649150 | 63.1.1.0 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain | 0.56 | 49.0 | 4.14e-01 | 100.0% | 78.7% |
| 3765289 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.55 | 33.0 | 3.31e-01 | 83.3% | 57.8% |
| 3535278 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 36.0 | 4.17e-01 | 87.8% | 98.3% |
| 5033242 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.55 | 40.0 | 4.11e-01 | 87.8% | 78.8% |
| 3684908 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.55 | 38.0 | 4.10e-01 | 71.1% | 98.7% |
| 3398093 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.54 | 33.0 | 3.97e-01 | 87.8% | 91.7% |
| 4357819 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.54 | 39.0 | 4.33e-01 | 87.8% | 97.1% |
| 3415741 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.54 | 34.0 | 2.93e-01 | 96.7% | 38.6% |
| 3727615 | 3270.1.1.1 ↗ | a+b two layers › a+b domain in heme oxygenase › a+b domain in heme oxygenase › a+b domain in heme oxygenase › DUF2470 | 0.54 | 45.0 | 4.44e-01 | 93.3% | 87.4% |
| 3225762 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.53 | 35.0 | 3.82e-01 | 81.1% | 81.3% |
| 3604264 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 44.0 | 4.25e-01 | 91.1% | 97.0% |
| 153749 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.53 | 48.0 | 3.21e-01 | 100.0% | 94.8% |
| 4881976 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.53 | 33.0 | 3.63e-01 | 87.8% | 77.0% |
| 4629022 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.53 | 38.0 | 4.19e-01 | 91.1% | 97.1% |
| 5046193 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.52 | 38.0 | 3.85e-01 | 87.8% | 75.6% |
| 3476418 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.52 | 39.0 | 3.48e-01 | 82.2% | 71.1% |
| 3628059 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.52 | 39.0 | 3.56e-01 | 82.2% | 64.8% |
| 3474609 | 3794.1.1.1 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › PCC_BT | 0.51 | 43.0 | 3.54e-01 | 93.3% | 71.2% |
| 5051706 | 331.1.1.1 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP | 0.51 | 39.0 | 3.85e-01 | 83.3% | 98.0% |
| 3388463 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 36.0 | 3.22e-01 | 77.8% | 53.8% |
| 3323530 | 4.1.1.118 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_15 | 0.51 | 33.0 | 3.73e-01 | 87.8% | 90.8% |
| 5046375 | 3794.1.1.0 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit | 0.51 | 37.0 | 3.90e-01 | 78.9% | 87.5% |