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PP034390.1__WRW34757.1__CF5_0060__00060

Bact-Vir

PP034390.1__WRW34757.1__CF5_0060__00060

Identity

Accession:
PP034390 ↗
Kingdom:
phage

Quality

90.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Silviavirus› Staphylococcus_phage_CF5

TaxID: 3113739

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-65
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4olsA00 3.40.80.10 Alpha Beta › 3-Layer(aba) Sandwich › Lysozyme-like › Peptidoglycan recognition protein-like 0.89 82.0 5.75e-01 100.0% 35.7%
4ivvA00 3.40.80.10 Alpha Beta › 3-Layer(aba) Sandwich › Lysozyme-like › Peptidoglycan recognition protein-like 0.78 69.0 5.02e-01 100.0% 77.0%
3dxqB02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.51 37.0 2.78e-01 84.6% 67.8%
4q6rB01 6.10.140.2150 Special › Helix non-globular › Helix Hairpins › 0.50 27.0 2.95e-01 70.8% 60.4%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4031908 285.1.1.1 ↗ a+b three layers › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › Amidase_2 0.89 83.0 5.76e-01 100.0% 35.4%
4837356 285.1.1.1 ↗ a+b three layers › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › Amidase_2 0.85 62.0 4.57e-01 76.9% 31.8%