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PP78_83
Euk-VirSpodoptera_eridania_nucleopolyhedrovirus
PP78_83__YP_010087003__Spodoptera_eridania_nucleopolyhedrovirus__2315721
Identity
- Accession:
- YP_010087003 ↗
- Protein ID:
- PP78_83
- Kingdom:
- euk
Quality
62.9
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Spodoptera_eridania_nucleopolyhedrovirus
TaxID: 2315721
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 419-487
Domain cluster:
rep: PP78_83__YP_010086420__Spodoptera_exempta_nucleopolyhedrovirus__1242863__D382-450
D2
medium
residues 4-40_52-81_94-165
Domain cluster:
rep: p78_83__YP_010086876__Cryptophlebia_peltastica_nucleopolyhedrovirus__2304025__D7-49_66-137
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2etdA00 | 1.20.1440.20 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › LemA-like domain | 0.66 | 43.0 | 4.30e-01 | 95.0% | 64.5% |
| 2lfrA00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.61 | 29.0 | 3.28e-01 | 88.5% | 56.8% |
| 7vevA01 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.55 | 39.0 | 3.24e-01 | 73.4% | 91.9% |
| 6epyA01 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.53 | 38.0 | 3.10e-01 | 72.7% | 88.3% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5069815 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.77 | 47.0 | 5.95e-01 | 96.4% | 100.0% |
| 5061375 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.77 | 39.0 | 5.53e-01 | 82.7% | 100.0% |
| 4927172 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.76 | 46.0 | 5.43e-01 | 88.5% | 85.0% |
| 5068187 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.70 | 36.0 | 4.84e-01 | 83.5% | 94.6% |
| 5070510 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.66 | 38.0 | 4.89e-01 | 86.3% | 98.8% |
| 4956012 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.66 | 46.0 | 5.25e-01 | 97.1% | 94.3% |
| 3970705 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.65 | 38.0 | 4.83e-01 | 83.5% | 100.0% |
| 3323850 | 601.1.1.58 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › FPP | 0.64 | 35.0 | 4.62e-01 | 84.9% | 98.7% |
| 4937924 | 632.18.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 | 0.60 | 35.0 | 4.45e-01 | 82.7% | 100.0% |
| 4628639 | 150.1.1.59 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Coat_F | 0.58 | 25.0 | 3.01e-01 | 73.4% | 57.9% |