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PPR_Contig_984988_prodigal-single.1__X__X__00039
Bact-VirPPR_Contig_984988_prodigal-single.1__X__X__00039
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-116
Domain cluster:
rep: JGI24723J26617_10000007_prodigal-single.1__X__X__00431__D4-118
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07661.20 best | MORN_2 | 13.0 | 1.40e-01 | 19.1% | 86.4% |
| PF07661.20 | MORN_2 | 26.4 | 6.20e-06 | 19.1% | 100.0% |
| PF07661.20 | MORN_2 | 15.0 | 3.20e-02 | 16.5% | 72.7% |
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2af5A02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.67 | 57.0 | 5.35e-01 | 92.2% | 82.6% |
| 4r03A00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.64 | 45.0 | 4.69e-01 | 73.0% | 86.2% |
| 6i8xA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.60 | 45.0 | 4.09e-01 | 78.3% | 67.1% |
| 2af5A01 | 2.40.128.160 | Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) | 0.60 | 30.0 | 4.07e-01 | 71.3% | 100.0% |
| 1vyfA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 44.0 | 4.21e-01 | 78.3% | 68.1% |
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.58 | 49.0 | 4.64e-01 | 91.3% | 86.3% |
| 4fr9A00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 45.0 | 4.22e-01 | 82.6% | 73.0% |
| 1ospO01 | 2.40.128.160 | Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) | 0.57 | 47.0 | 4.87e-01 | 87.8% | 100.0% |
| 3pquA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.57 | 42.0 | 3.64e-01 | 76.5% | 88.1% |
| 4hbrA00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 44.0 | 4.13e-01 | 82.6% | 75.7% |
| 4z48A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.56 | 50.0 | 3.94e-01 | 97.4% | 89.2% |
| 4ghbA00 | 2.40.160.190 | Mainly Beta › Beta Barrel › Porin › | 0.55 | 49.0 | 3.87e-01 | 100.0% | 77.6% |
| 1mufA01 | 2.20.110.10 | Mainly Beta › Single Sheet › Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain › Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0.55 | 46.0 | 4.72e-01 | 93.0% | 99.1% |
| 4h89A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 40.0 | 3.54e-01 | 75.7% | 98.2% |
| 3uaqB02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.54 | 39.0 | 3.48e-01 | 73.9% | 93.9% |
| 3stoA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.54 | 38.0 | 3.54e-01 | 73.0% | 78.1% |
| 3ia8A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 44.0 | 3.96e-01 | 88.7% | 70.4% |
| 4ns4A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 41.0 | 3.17e-01 | 81.7% | 73.4% |
| 5c82A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 39.0 | 3.41e-01 | 74.8% | 98.2% |
| 2ml5A00 | 3.10.450.410 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 36.0 | 3.30e-01 | 93.9% | 51.6% |
| 4xrtA01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 41.0 | 3.89e-01 | 85.2% | 78.2% |
| 1i72A00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.52 | 45.0 | 3.57e-01 | 96.5% | 54.2% |
| 3holA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.52 | 40.0 | 3.56e-01 | 80.9% | 87.3% |
| 5bp3B00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.52 | 41.0 | 3.07e-01 | 82.6% | 95.7% |
| 1mhmA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.51 | 45.0 | 3.52e-01 | 96.5% | 56.5% |
| 3r4qA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 28.0 | 2.71e-01 | 97.4% | 43.2% |
| 2xe4A02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.51 | 44.0 | 3.24e-01 | 99.1% | 44.0% |
| 4gakA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 47.0 | 3.63e-01 | 100.0% | 86.8% |
| 1pjxA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.51 | 45.0 | 3.36e-01 | 100.0% | 72.3% |
| 2wkkA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 35.0 | 3.29e-01 | 71.3% | 54.7% |
| 4k35A02 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.50 | 41.0 | 3.44e-01 | 88.7% | 94.6% |
| 7obmA01 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.50 | 44.0 | 3.26e-01 | 100.0% | 91.9% |
| 5d1pA01 | 3.10.450.740 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 29.0 | 3.62e-01 | 86.1% | 97.0% |
| 7snsB01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 41.0 | 3.70e-01 | 89.6% | 82.1% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3965839 | 77.1.1.6 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › MORN_2 | 0.86 | 71.0 | 6.29e-01 | 91.3% | 63.2% |
| 5081937 | 77.2.1.0 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N | 0.84 | 65.0 | 7.15e-01 | 80.0% | 95.8% |
| 3976809 | 77.1.1.6 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › MORN_2 | 0.83 | 71.0 | 6.04e-01 | 89.6% | 60.0% |
| 3968348 | 77.2.1.5 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN_2 | 0.81 | 71.0 | 6.25e-01 | 92.2% | 66.3% |
| 3976807 | 77.1.1.6 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › MORN_2 | 0.79 | 70.0 | 5.44e-01 | 92.2% | 48.2% |
| 3386526 | 77.1.1.6 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › MORN_2 | 0.78 | 67.0 | 5.81e-01 | 89.6% | 67.9% |
| 4877157 | 77.1.1.1 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Lipoprotein_1 | 0.74 | 67.0 | 4.80e-01 | 97.4% | 42.4% |
| 4050277 | 77.2.1.4 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN+SET7_N | 0.72 | 61.0 | 5.30e-01 | 92.2% | 60.0% |
| 3287702 | 77.1.1.0 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein | 0.71 | 61.0 | 6.14e-01 | 94.8% | 91.3% |
| 3760058 | 77.2.1.4 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN+SET7_N | 0.68 | 58.0 | 5.34e-01 | 92.2% | 72.0% |
| 4348598 | 3894.1.1.6 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › Glyco_trans_A_1 | 0.68 | 62.0 | 5.88e-01 | 100.0% | 89.6% |
| 4226766 | 3894.1.1.3 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfB_M | 0.66 | 56.0 | 5.41e-01 | 98.3% | 81.5% |
| 4031984 | 3894.1.1.1 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › Asp1 | 0.66 | 56.0 | 5.50e-01 | 96.5% | 84.8% |
| 3388794 | 71.2.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like | 0.66 | 57.0 | 4.45e-01 | 93.0% | 71.7% |
| 3591979 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.66 | 55.0 | 5.04e-01 | 92.2% | 69.0% |
| 4200177 | 3894.1.1.3 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfB_M | 0.65 | 56.0 | 5.41e-01 | 98.3% | 82.3% |
| 1780243 | 3894.1.1.3 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfB_M | 0.65 | 55.0 | 4.29e-01 | 98.3% | 42.5% |
| 4273033 | 3894.1.1.2 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfA_EBD | 0.65 | 58.0 | 5.67e-01 | 97.4% | 89.6% |
| 3581438 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.65 | 58.0 | 4.08e-01 | 99.1% | 53.2% |
| 3236808 | 77.1.1.0 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein | 0.64 | 40.0 | 4.73e-01 | 85.2% | 91.3% |
| 3311784 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.64 | 50.0 | 4.86e-01 | 85.2% | 76.0% |
| 3253682 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.63 | 55.0 | 5.07e-01 | 99.1% | 73.3% |
| 3263602 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.63 | 56.0 | 4.02e-01 | 100.0% | 71.5% |
| 2722572 | 3894.1.1.3 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfB_M | 0.63 | 55.0 | 5.20e-01 | 95.7% | 87.4% |
| 3559952 | 71.2.1.4 ↗ | beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › CATIP_N | 0.63 | 57.0 | 4.48e-01 | 100.0% | 72.5% |
| 4031359 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.62 | 39.0 | 4.51e-01 | 72.2% | 85.9% |
| 2723017 | 3894.1.1.0 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain | 0.62 | 55.0 | 5.37e-01 | 96.5% | 90.3% |
| 3709361 | 3523.1.1.4 ↗ | beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › MORN | 0.62 | 52.0 | 5.29e-01 | 95.7% | 92.2% |
| 3601033 | 77.2.1.0 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N | 0.62 | 52.0 | 4.83e-01 | 92.2% | 72.4% |
| 3892200 | 71.2.1.4 ↗ | beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › CATIP_N | 0.62 | 57.0 | 4.47e-01 | 100.0% | 71.5% |
| 3600402 | 77.2.1.0 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N | 0.62 | 52.0 | 3.61e-01 | 92.2% | 30.5% |
| 4024499 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.61 | 52.0 | 4.76e-01 | 92.2% | 70.7% |
| 3612462 | 77.3.1.3 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN | 0.61 | 51.0 | 5.14e-01 | 91.3% | 90.4% |
| 3388896 | 79.1.1.27 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › MORN | 0.61 | 52.0 | 4.77e-01 | 93.0% | 76.0% |
| 4011234 | 4291.1.1.0 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein | 0.61 | 54.0 | 3.76e-01 | 100.0% | 51.0% |
| 3570911 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.61 | 54.0 | 3.85e-01 | 100.0% | 56.4% |
| 3667729 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.59 | 53.0 | 4.03e-01 | 99.1% | 96.0% |
| 3890448 | 77.3.1.3 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN | 0.59 | 51.0 | 5.09e-01 | 95.7% | 95.0% |
| 3714740 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.59 | 45.0 | 4.47e-01 | 80.9% | 80.8% |
| 4024399 | 844.1.1.1 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Tub | 0.59 | 46.0 | 3.56e-01 | 84.3% | 69.6% |
| 3947165 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.54 | 49.0 | 4.52e-01 | 100.0% | 96.0% |
| 4055106 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.54 | 42.0 | 3.64e-01 | 83.5% | 96.2% |
| 5047051 | 5.1.4.663 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › SBBP | 0.54 | 47.0 | 3.42e-01 | 100.0% | 59.7% |
| 3746311 | 844.1.1.4 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase | 0.54 | 48.0 | 3.95e-01 | 99.1% | 68.1% |
| 3481201 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.53 | 47.0 | 3.99e-01 | 98.3% | 76.4% |
| 3413401 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 47.0 | 3.17e-01 | 100.0% | 62.1% |
| 4259027 | 9.3.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Eryth_link_C | 0.53 | 38.0 | 3.82e-01 | 77.4% | 95.1% |
| 3487487 | 844.1.1.4 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase | 0.52 | 46.0 | 3.88e-01 | 100.0% | 70.5% |
| 3317211 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.52 | 44.0 | 3.76e-01 | 99.1% | 57.4% |
| 3920826 | 844.1.1.4 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase | 0.51 | 46.0 | 4.05e-01 | 99.1% | 72.4% |
| 4429728 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.51 | 44.0 | 3.34e-01 | 100.0% | 79.0% |
| 5039064 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 45.0 | 3.19e-01 | 100.0% | 58.7% |
| 4322242 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.51 | 40.0 | 3.18e-01 | 84.3% | 44.7% |
| 3464033 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.51 | 44.0 | 3.84e-01 | 98.3% | 73.5% |
| 3439467 | 241.6.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Arp2/3 complex subunits › Arp2/3 complex subunits | 0.50 | 37.0 | 3.60e-01 | 77.4% | 85.4% |