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PPR_Contig_984988_prodigal-single.1__X__X__00234

Bact-Vir

PPR_Contig_984988_prodigal-single.1__X__X__00234

Identity

Kingdom:
phage

Quality

78.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-55
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2hujA00 1.20.120.440 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like 0.57 50.0 3.79e-01 98.1% 76.8%
1zkeA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 40.0 3.62e-01 94.3% 56.8%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5046413 632.11.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.73 48.0 4.75e-01 92.5% 65.5%
4848962 3016.1.1.5 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › SHMT 0.64 44.0 3.89e-01 71.7% 56.2%
2055367 650.1.1.3 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › HsbA 0.63 48.0 4.34e-01 83.0% 61.4%
4574972 192.7.1.0 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.62 47.0 4.54e-01 88.7% 71.7%
3887211 605.1.1.140 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HIG_1_N 0.61 47.0 4.27e-01 92.5% 62.9%
3713592 3444.1.1.2 ↗ alpha arrays › DP domain › DP domain › DP domain › ZNHIT3_C 0.53 40.0 3.93e-01 94.3% 76.9%