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PPR_Contig_984988_prodigal-single.1__X__X__00257
Bact-VirPPR_Contig_984988_prodigal-single.1__X__X__00257
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 38-87
D2
high
residues 163-255
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dnyA00 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 61.0 | 5.77e-01 | 97.8% | 78.9% |
| 6fzvD01 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.61 | 50.0 | 4.64e-01 | 89.2% | 92.4% |
| 3fg8A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.60 | 36.0 | 3.45e-01 | 77.4% | 51.9% |
| 2qqkA02 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.59 | 48.0 | 4.56e-01 | 93.5% | 73.9% |
| 3pnrB00 | 2.60.40.2020 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 46.0 | 4.20e-01 | 84.9% | 81.4% |
| 1y8cA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.57 | 33.0 | 3.95e-01 | 84.9% | 88.3% |
| 2xgrA00 | 3.40.570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A | 0.54 | 43.0 | 3.48e-01 | 89.2% | 66.5% |
| 3kf8B00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 43.0 | 4.02e-01 | 91.4% | 82.5% |
| 5fm5P00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 36.0 | 3.58e-01 | 73.1% | 74.5% |
| 7rpyA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 43.0 | 4.24e-01 | 97.8% | 95.1% |
| 1djsA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 36.0 | 3.54e-01 | 74.2% | 70.6% |
| 5wy8B03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 36.0 | 3.48e-01 | 76.3% | 76.8% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3363076 | 3156.1.1.9 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase_3 | 0.71 | 53.0 | 5.32e-01 | 78.5% | 96.8% |
| 4962396 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.66 | 38.0 | 3.60e-01 | 100.0% | 48.2% |
| 3548304 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.60 | 47.0 | 4.67e-01 | 84.9% | 84.0% |
| 4024284 | 11.1.1.162 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Inhibitor_I71 | 0.59 | 46.0 | 4.10e-01 | 84.9% | 80.9% |
| 4175959 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.52 | 45.0 | 3.32e-01 | 97.8% | 99.2% |