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PPR_Contig_984988_prodigal-single.1__X__X__00279

Bact-Vir

PPR_Contig_984988_prodigal-single.1__X__X__00279

Identity

Kingdom:
phage

Quality

84.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 39-124
PDB
CATH (60)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4yo1A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.85 67.0 6.66e-01 100.0% 79.8%
3k6yA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.85 66.0 6.48e-01 100.0% 76.1%
4ic6C01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 70.0 6.37e-01 100.0% 75.5%
2o8lA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.76 66.0 6.28e-01 100.0% 80.2%
1qa7A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 64.0 5.85e-01 100.0% 73.6%
2olgA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 66.0 5.69e-01 97.7% 80.6%
2bhgA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 62.0 6.05e-01 100.0% 84.8%
5lhrA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.72 66.0 5.87e-01 97.7% 76.1%
1a5iA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.72 65.0 5.82e-01 97.7% 75.4%
1fiwA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.72 65.0 5.74e-01 97.7% 78.3%
5f8zA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.72 65.0 5.91e-01 97.7% 76.8%
3h7oA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 64.0 5.81e-01 97.7% 74.1%
2f91A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 64.0 5.84e-01 97.7% 78.8%
4h4fA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 65.0 5.90e-01 97.7% 77.3%
1m9uA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 64.0 5.88e-01 97.7% 78.9%
1ltoA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 64.0 5.87e-01 97.7% 77.1%
1dleA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 65.0 5.62e-01 100.0% 69.8%
5eokA05 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.70 65.0 4.66e-01 100.0% 38.3%
3gzkA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.70 43.0 4.50e-01 81.4% 67.1%
4i86A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.69 53.0 5.02e-01 97.7% 68.6%
2aiqA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.69 60.0 5.43e-01 100.0% 70.8%
3tk9A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.68 60.0 5.54e-01 97.7% 75.7%
4lk4A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.67 61.0 5.86e-01 97.7% 89.6%
5hccB02 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.67 46.0 4.52e-01 81.4% 65.3%
1l0qA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 39.0 3.87e-01 82.6% 54.4%
2a74A02 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.66 46.0 4.37e-01 80.2% 61.4%
3f7eA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 57.0 5.06e-01 100.0% 85.2%
3c12A02 2.60.40.4070 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 48.0 4.79e-01 80.2% 77.0%
1ci0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.64 56.0 4.33e-01 100.0% 68.1%
2a2jA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.64 56.0 4.31e-01 100.0% 69.5%
2ptfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.64 56.0 4.69e-01 97.7% 82.3%
3zssA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 46.0 4.21e-01 82.6% 58.4%
1p7hL02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 49.0 4.57e-01 86.0% 67.3%
1vw3C01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.62 49.0 4.32e-01 86.0% 60.3%
1ut9A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 45.0 4.31e-01 81.4% 66.3%
3gm8A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 45.0 4.28e-01 83.7% 63.8%
3bgaA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 47.0 4.49e-01 83.7% 72.4%
5c71A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 43.0 4.23e-01 84.9% 66.7%
6ecaA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 43.0 4.19e-01 83.7% 67.4%
2xwxA03 2.60.40.2550 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 43.0 4.19e-01 82.6% 66.3%
2qeaB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 51.0 4.32e-01 100.0% 69.2%
3b7yA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.59 46.0 3.97e-01 86.0% 76.4%
2qlcA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.59 46.0 4.11e-01 84.9% 61.1%
3bgaA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 46.0 4.23e-01 83.7% 67.6%
3gf8A01 2.60.40.2100 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 43.0 3.59e-01 82.6% 67.1%
3hn3A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 43.0 4.10e-01 83.7% 68.3%
5h80B03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.56 47.0 3.43e-01 94.2% 79.7%
3d2lA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.56 29.0 3.29e-01 84.9% 66.7%
6fwvA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 40.0 4.03e-01 97.7% 75.6%
2z04B03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.55 45.0 3.61e-01 94.2% 95.2%
2wb7A02 2.60.40.2050 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 42.0 3.50e-01 83.7% 65.2%
4jqrA00 2.60.120.1350 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF4465 0.54 42.0 3.21e-01 87.2% 35.6%
3nqhA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 43.0 3.71e-01 87.2% 60.3%
2df7A02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.53 42.0 3.61e-01 86.0% 59.3%
4divV01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.53 45.0 3.93e-01 98.8% 86.9%
7jooC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 39.0 3.79e-01 80.2% 81.4%
4oq8A00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.52 38.0 3.25e-01 86.0% 46.5%
2kuqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 38.0 3.19e-01 80.2% 56.2%
4htlA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.51 40.0 3.85e-01 86.0% 86.0%
1iowA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.50 43.0 3.66e-01 96.5% 66.4%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3428387 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.86 77.0 5.88e-01 100.0% 45.6%
4329871 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.85 68.0 5.13e-01 100.0% 37.9%
140973 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.85 66.0 4.70e-01 100.0% 30.8%
5063188 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.84 76.0 5.51e-01 100.0% 38.6%
5063379 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.83 66.0 5.08e-01 100.0% 40.0%
3956586 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.83 73.0 5.15e-01 100.0% 33.8%
3276050 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.82 71.0 5.09e-01 100.0% 34.2%
5057020 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.80 71.0 6.18e-01 100.0% 65.6%
3580932 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.79 67.0 4.62e-01 100.0% 29.4%
3447771 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.78 67.0 4.74e-01 100.0% 32.5%
3432441 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.77 69.0 4.82e-01 100.0% 32.5%
3392280 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.76 70.0 4.85e-01 100.0% 40.0%
3244773 1.1.5.49 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF316 0.76 70.0 4.86e-01 100.0% 52.7%
4152664 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.75 69.0 4.71e-01 100.0% 37.9%
3899289 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.75 69.0 4.73e-01 100.0% 32.5%
3409540 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.75 68.0 4.77e-01 100.0% 34.3%
261 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.74 65.0 4.78e-01 100.0% 38.2%
4453816 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.74 69.0 4.66e-01 100.0% 30.7%
3546992 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.74 68.0 4.68e-01 100.0% 34.1%
3407091 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.73 68.0 4.67e-01 100.0% 43.3%
4652006 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.73 67.0 4.63e-01 100.0% 43.4%
3940846 1.1.5.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.73 68.0 4.71e-01 100.0% 36.3%
3229867 1.1.17.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.73 66.0 4.67e-01 100.0% 50.6%
3408725 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.73 67.0 4.66e-01 100.0% 42.7%
3229859 1.1.17.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.72 66.0 4.66e-01 100.0% 48.6%
3497558 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.72 67.0 4.69e-01 100.0% 38.0%
3406348 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.72 67.0 4.60e-01 100.0% 34.4%
3411238 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.72 65.0 4.50e-01 100.0% 41.8%
3225260 1.1.17.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.71 64.0 4.53e-01 100.0% 50.9%
3394182 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.71 61.0 4.42e-01 100.0% 34.3%
3863965 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.71 65.0 4.62e-01 100.0% 36.5%
3927088 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.71 65.0 4.49e-01 100.0% 43.7%
3936403 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.70 47.0 4.44e-01 81.4% 57.1%
3066474 1.1.17.2 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_C3 0.70 59.0 4.36e-01 100.0% 37.5%
5039154 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.69 45.0 4.52e-01 83.7% 64.4%
3856305 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.68 62.0 4.41e-01 100.0% 35.9%
5080880 11.1.1.608 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Por_Secre_tail 0.68 48.0 4.79e-01 82.6% 71.1%
4978217 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 49.0 4.67e-01 83.7% 65.0%
3596679 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.67 53.0 4.38e-01 86.0% 76.8%
3216927 11.1.1.905 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_ILCR1 0.67 51.0 4.63e-01 81.4% 63.5%
3794250 11.1.1.31 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG2 0.65 45.0 3.81e-01 81.4% 42.8%
4955989 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.63 43.0 4.16e-01 84.9% 63.2%
3957192 1.1.5.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.63 55.0 4.91e-01 100.0% 72.8%
3998968 10.32.1.203 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.62 50.0 4.23e-01 90.7% 52.4%
2137682 1.1.5.32 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZNR 0.61 53.0 5.05e-01 98.8% 85.3%
3233126 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.60 47.0 4.73e-01 98.8% 84.7%
4576942 11.1.1.154 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgE_dom_N_S 0.59 46.0 3.42e-01 83.7% 73.8%
3493644 10.32.1.203 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.59 49.0 3.94e-01 90.7% 59.4%
4033712 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.59 49.0 4.98e-01 94.2% 98.8%
3439596 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.58 52.0 4.41e-01 100.0% 70.0%
3364460 10.32.1.203 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.58 47.0 3.96e-01 88.4% 54.5%
4952429 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.57 49.0 4.69e-01 98.8% 95.0%
5044400 321.1.1.0 a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase 0.56 48.0 3.09e-01 100.0% 97.8%
3703423 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.55 43.0 3.70e-01 83.7% 75.6%
3993913 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 44.0 3.72e-01 86.0% 55.0%
5055894 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.55 37.0 3.35e-01 70.9% 80.8%
3164699 1.1.13.33 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DNA_circ_N 0.54 47.0 4.33e-01 98.8% 95.7%
3935252 11.1.1.957 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fn3_Dep-1_6th 0.54 42.0 3.83e-01 83.7% 62.6%
3491636 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.54 48.0 4.05e-01 100.0% 67.6%
3607434 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.54 41.0 3.63e-01 83.7% 77.0%
3734729 206.1.3.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp 0.52 45.0 3.31e-01 97.7% 61.6%
3217734 11.1.3.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like 0.51 38.0 3.40e-01 82.6% 61.5%
1905738 219.1.1.28 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.51 33.0 2.85e-01 98.8% 38.5%
5076798 321.1.1.7 a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 0.51 43.0 2.83e-01 98.8% 98.9%
3205297 109.1.1.35 alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › PF25907 0.51 36.0 2.53e-01 76.7% 36.5%
3231054 10.1.1.4 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.50 40.0 3.43e-01 86.0% 77.1%
D2 high residues 138-233
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00089.33 best Trypsin 24.3 3.50e-05 82.3% 21.8%
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2as9B01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.88 71.0 7.03e-01 100.0% 80.2%
4ri0A01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.87 71.0 5.45e-01 100.0% 41.4%
1wczA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.87 75.0 7.01e-01 100.0% 75.7%
2w5eA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.86 63.0 7.06e-01 96.9% 97.3%
3k6yA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.86 82.0 7.86e-01 100.0% 93.5%
3otpA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.86 81.0 6.16e-01 100.0% 47.8%
2rceA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.85 81.0 7.78e-01 100.0% 89.6%
4ic5A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.84 76.0 7.38e-01 100.0% 87.5%
1p3cA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.81 68.0 6.58e-01 93.8% 80.0%
1agjA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.80 66.0 5.77e-01 92.7% 61.9%
5hmaA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.79 74.0 7.19e-01 100.0% 92.3%
3l6pA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.78 59.0 5.75e-01 96.9% 73.3%
1a1rA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.78 64.0 6.82e-01 100.0% 97.6%
1havB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 67.0 6.57e-01 91.7% 92.2%
1hpgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 65.0 6.43e-01 91.7% 84.8%
1arbA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 69.0 6.26e-01 93.8% 78.7%
1boqA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 67.0 6.48e-01 91.7% 86.9%
2ey4D00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.77 47.0 5.34e-01 82.3% 80.0%
1zyoA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 65.0 6.44e-01 100.0% 86.1%
2bhgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.74 66.0 6.54e-01 100.0% 90.2%
1wqsA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.74 65.0 6.35e-01 93.8% 97.1%
2wv9A01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.73 60.0 4.86e-01 93.8% 48.3%
3cp7B02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 67.0 6.52e-01 100.0% 90.5%
3f1sB03 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.72 66.0 6.17e-01 100.0% 87.8%
1lvbA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 60.0 5.75e-01 94.8% 79.6%
2l1tA00 2.30.110.70 Mainly Beta › Roll › Pnp Oxidase; Chain A › 0.66 57.0 5.52e-01 96.9% 83.5%
1ylnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.66 59.0 5.58e-01 97.9% 86.8%
4i86A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.65 53.0 5.26e-01 99.0% 82.4%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 39.0 4.43e-01 92.7% 80.6%
3dnhA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.63 55.0 4.79e-01 97.9% 88.1%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 40.0 4.51e-01 92.7% 86.1%
2ptfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 54.0 4.72e-01 96.9% 87.1%
4lduA03 2.30.30.1040 Mainly Beta › Roll › SH3 type barrels. › 0.62 41.0 4.74e-01 93.8% 95.6%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 34.0 3.97e-01 71.9% 79.7%
2dpyA00 3.40.50.12240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 41.0 2.67e-01 78.1% 49.3%
1w99A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 42.0 3.38e-01 85.4% 69.1%
4nx9A02 2.60.40.4390 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 38.0 3.56e-01 76.0% 77.7%
4h75A00 2.80.10.70 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty 0.53 41.0 3.27e-01 84.4% 94.5%
1mrzB02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.52 38.0 3.68e-01 78.1% 90.2%
3mfiA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.51 35.0 3.29e-01 71.9% 67.2%
ECOD (87)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1308507 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.91 72.0 5.60e-01 100.0% 42.2%
5063188 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.91 79.0 5.85e-01 100.0% 40.5%
5063379 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.89 80.0 6.24e-01 100.0% 49.4%
3493511 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.89 81.0 5.83e-01 100.0% 38.7%
398505 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.89 85.0 6.17e-01 100.0% 43.9%
None 0.88 76.0 5.63e-01 100.0% 40.1%
3425181 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.88 73.0 5.35e-01 100.0% 36.5%
3816110 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.87 73.0 5.32e-01 100.0% 36.9%
None 0.87 76.0 5.64e-01 100.0% 40.8%
3433009 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.87 76.0 5.35e-01 100.0% 34.1%
None 0.87 75.0 5.59e-01 100.0% 40.5%
3672433 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.87 75.0 5.14e-01 100.0% 30.0%
4441614 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.87 82.0 5.82e-01 100.0% 38.0%
3532116 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.86 81.0 6.03e-01 100.0% 44.2%
3948218 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.86 82.0 5.86e-01 100.0% 39.6%
3443107 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.86 75.0 5.48e-01 100.0% 38.7%
4166426 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.86 82.0 5.73e-01 100.0% 36.2%
3843527 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.86 81.0 5.93e-01 100.0% 42.2%
3428386 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.86 74.0 5.30e-01 100.0% 34.8%
140973 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.86 82.0 5.97e-01 100.0% 44.1%
4028981 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.85 81.0 6.00e-01 100.0% 45.9%
4683578 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.85 81.0 5.94e-01 100.0% 43.6%
4173923 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.85 81.0 5.86e-01 100.0% 44.7%
5072499 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.85 79.0 5.98e-01 100.0% 46.5%
3280955 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.85 81.0 5.93e-01 100.0% 48.4%
4600945 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.85 80.0 5.90e-01 100.0% 43.2%
4169622 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.85 79.0 5.89e-01 100.0% 43.2%
3448643 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.85 81.0 6.09e-01 100.0% 46.8%
3436414 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.85 72.0 5.44e-01 100.0% 41.0%
4028467 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.85 79.0 5.48e-01 100.0% 34.2%
4352127 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.85 80.0 5.70e-01 100.0% 42.7%
3659932 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.84 80.0 5.69e-01 100.0% 40.4%
4453816 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.84 80.0 5.47e-01 100.0% 43.1%
3449628 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.84 72.0 6.74e-01 100.0% 75.7%
3962616 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.84 80.0 6.41e-01 100.0% 57.6%
4939745 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.84 80.0 5.89e-01 100.0% 43.6%
4031177 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.84 77.0 5.72e-01 100.0% 43.0%
4324118 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.84 79.0 5.73e-01 100.0% 40.8%
4329871 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.84 73.0 5.66e-01 100.0% 46.3%
3650249 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.84 80.0 5.70e-01 100.0% 40.0%
4647114 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.84 79.0 5.72e-01 100.0% 41.2%
4387060 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.84 77.0 5.69e-01 100.0% 42.8%
4247805 1.1.5.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.84 77.0 5.71e-01 100.0% 43.6%
None 0.83 77.0 5.73e-01 100.0% 43.8%
3647453 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.83 79.0 5.57e-01 100.0% 38.5%
4625374 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.83 79.0 5.76e-01 100.0% 43.0%
4822902 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.83 71.0 5.92e-01 100.0% 55.1%
3284072 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.83 79.0 5.68e-01 100.0% 48.5%
3284172 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.83 78.0 5.94e-01 100.0% 47.8%
3956586 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.83 79.0 5.68e-01 100.0% 43.8%
3816593 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.83 78.0 5.80e-01 100.0% 45.0%
3989070 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.83 72.0 5.35e-01 100.0% 40.4%
4244642 6151.1.1.1 alpha bundles › Helical bundle domain in S46 peptidase › Helical bundle domain in S46 peptidase › Helical bundle domain in S46 peptidase › Peptidase_S46 0.83 78.0 5.02e-01 100.0% 37.2%
3377696 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.83 67.0 5.15e-01 100.0% 41.0%
3437290 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.83 71.0 5.31e-01 100.0% 40.5%
3258480 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.82 78.0 5.31e-01 100.0% 34.3%
3443528 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.82 74.0 5.53e-01 100.0% 42.3%
3960279 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.82 78.0 6.62e-01 100.0% 75.9%
3428120 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.82 78.0 5.34e-01 100.0% 34.5%
3468829 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.82 78.0 5.56e-01 100.0% 39.9%
3950281 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.82 78.0 5.70e-01 100.0% 46.7%
4338510 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.82 77.0 5.76e-01 100.0% 44.7%
3375203 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.82 78.0 5.39e-01 100.0% 42.5%
3883172 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.82 68.0 6.84e-01 87.5% 87.4%
3276425 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.81 77.0 5.31e-01 100.0% 34.7%
3969739 1.1.17.9 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › PF30586 0.81 76.0 5.54e-01 100.0% 42.9%
3907927 1.1.5.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.81 67.0 7.12e-01 87.5% 97.6%
3448847 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.81 75.0 5.26e-01 100.0% 34.5%
22093 1.1.5.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.80 72.0 5.39e-01 100.0% 42.3%
3637221 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.80 76.0 5.34e-01 100.0% 40.8%
3432441 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.80 76.0 5.41e-01 100.0% 44.3%
220 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.80 72.0 5.37e-01 100.0% 42.3%
3415399 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.79 75.0 5.61e-01 100.0% 45.1%
5016520 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.79 74.0 5.43e-01 100.0% 46.4%
3530898 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.79 74.0 5.14e-01 100.0% 45.7%
4614564 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.78 71.0 5.49e-01 100.0% 47.7%
5019852 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.78 74.0 5.53e-01 100.0% 47.1%
3654499 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.78 73.0 6.57e-01 100.0% 79.2%
2141907 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.77 73.0 5.59e-01 100.0% 50.8%
2141908 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.76 70.0 5.40e-01 100.0% 47.7%
3066474 1.1.17.2 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_C3 0.75 69.0 5.24e-01 100.0% 45.7%
3198252 1.1.17.4 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_S64 0.74 69.0 5.63e-01 100.0% 56.5%
3469033 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.72 66.0 4.81e-01 100.0% 44.0%
3816594 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.72 66.0 4.86e-01 100.0% 45.8%
3599795 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.72 67.0 4.67e-01 100.0% 44.6%
3815495 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.64 39.0 4.54e-01 91.7% 84.3%
3650296 4.1.1.94 beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.58 39.0 4.01e-01 92.7% 71.6%