←Back to structures
PPR_Contig_984988_prodigal-single.1__X__X__00289
Bact-VirPPR_Contig_984988_prodigal-single.1__X__X__00289
Identity
- Kingdom:
- phage
Quality
45.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 500-645
D2
medium
residues 153-297
D3
medium
residues 298-461
Domain cluster:
rep: S2_005_003_R2_scaffold_7_prodigal-single.1__X__X__00146__D308-456
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qz4A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.65 | 29.0 | 4.26e-01 | 93.3% | 98.6% |
| 4wk5A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.57 | 39.0 | 3.39e-01 | 92.7% | 44.1% |
| 6a7hA01 | 1.20.140.180 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.56 | 25.0 | 2.81e-01 | 92.7% | 48.5% |
| 1gcvA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 40.0 | 4.29e-01 | 81.1% | 98.6% |
| 1yowA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.51 | 39.0 | 3.51e-01 | 79.3% | 72.2% |
| 1cg5B00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 39.0 | 4.16e-01 | 79.9% | 97.2% |
| 4zvaA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 39.0 | 4.13e-01 | 81.1% | 94.6% |
| 2xhsA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.50 | 38.0 | 3.39e-01 | 78.7% | 67.5% |
| 3bt5A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.50 | 37.0 | 3.90e-01 | 95.1% | 84.1% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3934423 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.50 | 43.0 | 3.39e-01 | 91.5% | 80.3% |
| 3217897 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.50 | 31.0 | 3.56e-01 | 85.4% | 83.3% |
| 3715668 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.50 | 38.0 | 3.84e-01 | 92.7% | 80.0% |