Papain-like_cysteine_peptidase

Euk-Vir

Pandoravirus_quercus

Papain-like_cysteine_peptidase__YP_009483524__Pandoravirus_quercus__2107709

Identity

45.5 mean pLDDT

Pandoravirus› Pandoravirus_quercus

TaxID: 2107709

View cluster (6 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 313-347_397-497

PDB

D2 medium residues 527-548_580-616

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00112.30 best	Peptidase_C1	31.6	2.50e-07	89.8%	16.8%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4oelB00	2.40.50.170	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Cysteine proteinases. Chain C	0.73	42.0	3.95e-01	98.3%	49.3%
1khiA01	2.30.30.30	Mainly Beta › Roll › SH3 type barrels. ›	0.62	44.0	4.05e-01	91.5%	58.7%
2c7yA00	3.40.47.10	Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase	0.57	46.0	2.89e-01	96.6%	90.3%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3964508	2.1.1.7 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1	0.58	39.0	3.67e-01	71.2%	97.3%
3727988	206.1.1.17 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Kdo	0.57	31.0	2.18e-01	72.9%	16.3%
4882461	210.1.1.1 ↗	a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome	0.51	33.0	2.76e-01	88.1%	39.0%