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Pentapeptide_4_domain_containing_protein
Euk-VirPandoravirus_dulcis
Pentapeptide_4_domain_containing_protein__YP_008318822__Pandoravirus_dulcis__1349409
Identity
- Accession:
- YP_008318822 ↗
- Protein ID:
- Pentapeptide_4_domain_containing_protein
- Kingdom:
- euk
Quality
44.6
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 22-84
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12937.13 best | F-box-like | 33.1 | 5.20e-08 | 73.0% | 91.5% |
| PF00646.39 | F-box | 23.0 | 8.00e-05 | 66.7% | 72.1% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ovrB01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.89 | 64.0 | 5.72e-01 | 76.2% | 55.2% |
| 3v7dD01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.77 | 70.0 | 5.93e-01 | 100.0% | 64.0% |
| 6m90A01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.77 | 66.0 | 5.66e-01 | 95.2% | 74.7% |
| 3l2oB01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.76 | 68.0 | 6.08e-01 | 100.0% | 83.0% |
| 1fs2A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.70 | 59.0 | 3.80e-01 | 88.9% | 27.8% |
| 1n81A00 | 1.10.3030.10 | Mainly Alpha › Orthogonal Bundle › Gametocyte protein Pfg27 › Gametocyte protein Pfg27 | 0.64 | 44.0 | 3.17e-01 | 71.4% | 27.4% |
| 2aw6A02 | 1.25.40.400 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.61 | 51.0 | 3.60e-01 | 98.4% | 55.2% |
| 2hroA02 | 1.10.274.10 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › PtsI, HPr-binding domain | 0.60 | 49.0 | 3.96e-01 | 92.1% | 58.6% |
| 2kjgA00 | 1.20.120.970 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.59 | 40.0 | 3.56e-01 | 71.4% | 56.6% |
| 2dsjA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.53 | 37.0 | 3.68e-01 | 76.2% | 88.1% |
| 3ygsP00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.53 | 38.0 | 3.35e-01 | 77.8% | 72.2% |
| 1lkoA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.52 | 37.0 | 2.99e-01 | 79.4% | 86.9% |
| 1vquA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.52 | 36.0 | 3.63e-01 | 77.8% | 86.6% |
| 3s5wA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 44.0 | 2.69e-01 | 96.8% | 33.9% |
ECOD (96)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3276040 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.95 | 70.0 | 6.69e-01 | 76.2% | 70.0% |
| 3833527 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.92 | 66.0 | 6.78e-01 | 74.6% | 80.0% |
| 3879992 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.90 | 76.0 | 6.97e-01 | 100.0% | 71.2% |
| 3261282 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.90 | 74.0 | 7.87e-01 | 90.5% | 100.0% |
| 3443639 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.90 | 65.0 | 7.24e-01 | 76.2% | 96.0% |
| 3201568 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.90 | 68.0 | 6.56e-01 | 95.2% | 71.4% |
| 3726840 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.89 | 76.0 | 7.09e-01 | 95.2% | 76.0% |
| 3420610 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.89 | 63.0 | 6.74e-01 | 74.6% | 90.9% |
| 3250247 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.88 | 63.0 | 6.48e-01 | 74.6% | 80.0% |
| 3730054 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.88 | 65.0 | 6.29e-01 | 77.8% | 70.0% |
| 3257387 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.88 | 80.0 | 7.11e-01 | 96.8% | 72.9% |
| 3613821 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.88 | 72.0 | 6.97e-01 | 95.2% | 78.6% |
| 3450709 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.87 | 60.0 | 6.68e-01 | 71.4% | 90.0% |
| 3643181 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.87 | 72.0 | 6.74e-01 | 95.2% | 74.7% |
| 3547224 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.86 | 71.0 | 6.36e-01 | 88.9% | 65.9% |
| 3407033 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.85 | 73.0 | 6.84e-01 | 93.7% | 77.3% |
| 3726578 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.85 | 76.0 | 6.81e-01 | 100.0% | 71.8% |
| 3446581 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.85 | 75.0 | 6.72e-01 | 95.2% | 78.8% |
| 3806475 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.85 | 74.0 | 6.88e-01 | 95.2% | 77.3% |
| 3348915 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.85 | 75.0 | 6.11e-01 | 95.2% | 70.0% |
| 3903969 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.85 | 76.0 | 6.67e-01 | 98.4% | 67.8% |
| 3886321 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.84 | 71.0 | 6.50e-01 | 93.7% | 71.2% |
| 4019682 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.84 | 75.0 | 6.44e-01 | 96.8% | 75.8% |
| 3770072 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.84 | 73.0 | 6.40e-01 | 93.7% | 65.6% |
| 3696138 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.84 | 78.0 | 6.66e-01 | 100.0% | 75.8% |
| 3617852 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.84 | 70.0 | 6.78e-01 | 93.7% | 81.4% |
| 3358453 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.84 | 69.0 | 6.68e-01 | 88.9% | 78.6% |
| 3446267 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.83 | 57.0 | 6.08e-01 | 71.4% | 87.3% |
| 3439461 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.83 | 70.0 | 6.93e-01 | 95.2% | 86.2% |
| 3617289 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.83 | 68.0 | 6.99e-01 | 87.3% | 95.0% |
| 3536855 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.83 | 75.0 | 6.44e-01 | 98.4% | 76.8% |
| 3344585 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.83 | 60.0 | 5.98e-01 | 76.2% | 76.9% |
| 3458366 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.83 | 57.0 | 6.52e-01 | 71.4% | 100.0% |
| 3204462 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.83 | 74.0 | 5.80e-01 | 96.8% | 75.2% |
| 3209791 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.83 | 74.0 | 7.33e-01 | 100.0% | 93.8% |
| 3909942 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.82 | 74.0 | 6.03e-01 | 100.0% | 55.5% |
| 3810025 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.82 | 59.0 | 5.68e-01 | 74.6% | 70.0% |
| 3451260 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.82 | 58.0 | 6.00e-01 | 74.6% | 81.7% |
| 3301272 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.82 | 72.0 | 5.89e-01 | 95.2% | 54.5% |
| 4023099 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.82 | 76.0 | 6.10e-01 | 100.0% | 72.2% |
| 3861026 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.82 | 74.0 | 6.32e-01 | 100.0% | 63.3% |
| 3664299 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.82 | 73.0 | 6.24e-01 | 95.2% | 72.6% |
| 3646821 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.82 | 72.0 | 6.75e-01 | 95.2% | 80.0% |
| 3810074 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.82 | 72.0 | 6.61e-01 | 95.2% | 74.7% |
| 3685535 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.82 | 75.0 | 6.88e-01 | 100.0% | 82.5% |
| 3654886 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.81 | 69.0 | 6.50e-01 | 95.2% | 77.3% |
| 3273645 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.81 | 73.0 | 6.66e-01 | 96.8% | 85.0% |
| 3802856 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.81 | 59.0 | 6.28e-01 | 77.8% | 89.1% |
| 3194125 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.81 | 74.0 | 6.70e-01 | 96.8% | 81.2% |
| 3742900 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.81 | 74.0 | 5.67e-01 | 100.0% | 77.0% |
| 3184741 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.80 | 73.0 | 6.00e-01 | 100.0% | 80.9% |
| 3256545 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.80 | 71.0 | 7.01e-01 | 95.2% | 92.3% |
| 3301883 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.80 | 73.0 | 6.72e-01 | 100.0% | 85.0% |
| 3320433 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.80 | 63.0 | 6.44e-01 | 92.1% | 88.3% |
| 3730967 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.80 | 75.0 | 6.16e-01 | 100.0% | 63.8% |
| 3186415 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.80 | 66.0 | 5.93e-01 | 88.9% | 80.0% |
| 3698023 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.80 | 74.0 | 5.92e-01 | 100.0% | 56.5% |
| 3631167 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.80 | 72.0 | 6.49e-01 | 100.0% | 78.8% |
| 3245054 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.79 | 64.0 | 6.72e-01 | 90.5% | 100.0% |
| 3812115 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.79 | 70.0 | 6.71e-01 | 98.4% | 87.7% |
| 3819291 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.79 | 55.0 | 5.88e-01 | 73.0% | 85.5% |
| 3740971 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.79 | 71.0 | 6.42e-01 | 100.0% | 74.1% |
| 3821430 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.79 | 67.0 | 6.20e-01 | 95.2% | 73.8% |
| 3666811 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.78 | 68.0 | 5.44e-01 | 95.2% | 52.5% |
| 3187719 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.78 | 66.0 | 6.23e-01 | 93.7% | 77.3% |
| 3781279 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.78 | 69.0 | 6.35e-01 | 95.2% | 80.0% |
| 3355293 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.78 | 72.0 | 6.06e-01 | 100.0% | 76.0% |
| 3729172 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.78 | 64.0 | 5.28e-01 | 88.9% | 78.2% |
| 3644704 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.78 | 71.0 | 6.40e-01 | 100.0% | 80.0% |
| 4012559 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.78 | 66.0 | 6.00e-01 | 93.7% | 69.4% |
| 3350782 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.78 | 67.0 | 4.21e-01 | 95.2% | 19.3% |
| 3355899 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.78 | 68.0 | 6.12e-01 | 96.8% | 84.7% |
| 3691218 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.78 | 62.0 | 6.59e-01 | 98.4% | 100.0% |
| 3188576 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.77 | 66.0 | 6.00e-01 | 95.2% | 76.5% |
| 3477761 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.77 | 68.0 | 6.11e-01 | 100.0% | 70.6% |
| 3664817 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.77 | 66.0 | 6.06e-01 | 93.7% | 80.0% |
| 4022899 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.77 | 72.0 | 6.01e-01 | 100.0% | 66.0% |
| 3453805 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.77 | 67.0 | 5.58e-01 | 95.2% | 60.0% |
| 3527636 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.77 | 64.0 | 5.74e-01 | 93.7% | 73.0% |
| 3300009 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.76 | 67.0 | 6.15e-01 | 95.2% | 77.5% |
| 3380116 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.76 | 64.0 | 6.29e-01 | 95.2% | 85.3% |
| 3323668 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.76 | 68.0 | 6.35e-01 | 95.2% | 82.7% |
| 3425357 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.76 | 67.0 | 6.31e-01 | 100.0% | 82.1% |
| 3728200 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.76 | 55.0 | 5.31e-01 | 76.2% | 68.6% |
| 3648014 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.76 | 65.0 | 6.19e-01 | 95.2% | 86.7% |
| 3491937 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.76 | 67.0 | 5.87e-01 | 95.2% | 78.9% |
| 3259869 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.76 | 65.0 | 5.91e-01 | 95.2% | 77.6% |
| 3176338 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.75 | 67.0 | 6.10e-01 | 95.2% | 76.2% |
| 3675534 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.75 | 66.0 | 6.05e-01 | 95.2% | 76.2% |
| 3726236 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.74 | 64.0 | 5.80e-01 | 95.2% | 75.3% |
| 3731690 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.74 | 63.0 | 5.83e-01 | 93.7% | 81.2% |
| 3311874 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.74 | 64.0 | 6.07e-01 | 95.2% | 85.3% |
| 3507975 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.73 | 63.0 | 4.07e-01 | 100.0% | 22.6% |
| 3812507 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.73 | 63.0 | 5.52e-01 | 95.2% | 65.6% |
| 3726268 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.69 | 60.0 | 5.37e-01 | 100.0% | 76.7% |
| 3697864 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.61 | 55.0 | 4.61e-01 | 100.0% | 80.0% |
D2
medium
residues 503-549_584-677