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Peptidase_M60-like_family
Euk-VirSalmon_gill_poxvirus
Peptidase_M60-like_family__YP_009162423__Salmon_gill_poxvirus__1680908
Identity
- Accession:
- YP_009162423 ↗
- Protein ID:
- Peptidase_M60-like_family
- Kingdom:
- euk
Quality
36.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 223-278
D2
medium
residues 472-594
D3
medium
residues 650-758
D4
medium
residues 794-898
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fcaA03 | 1.10.390.30 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Peptidase M60, enhancin-like domain 3 | 0.81 | 71.0 | 6.07e-01 | 93.3% | 61.3% |
| 5kd5A01 | 1.10.390.30 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Peptidase M60, enhancin-like domain 3 | 0.81 | 66.0 | 5.40e-01 | 85.7% | 63.1% |
| 7yx8A01 | 1.10.390.30 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Peptidase M60, enhancin-like domain 3 | 0.80 | 66.0 | 5.55e-01 | 86.7% | 69.0% |
| 1zp2A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.62 | 44.0 | 4.32e-01 | 73.3% | 77.7% |
| 2b9rA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.59 | 42.0 | 3.84e-01 | 73.3% | 68.6% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.59 | 42.0 | 4.41e-01 | 74.3% | 95.7% |
| 6k4yI00 | 1.10.1810.10 | Mainly Alpha › Orthogonal Bundle › Anti-sigma factor AsiA › Anti-Sigma Factor A | 0.58 | 36.0 | 3.90e-01 | 88.6% | 73.9% |
| 3lk5A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.58 | 41.0 | 2.93e-01 | 74.3% | 38.7% |
| 1aisB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.57 | 41.0 | 4.27e-01 | 76.2% | 97.0% |
| 1c9bA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.57 | 40.0 | 4.05e-01 | 74.3% | 96.2% |
| 4axsA00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.54 | 42.0 | 3.16e-01 | 85.7% | 92.8% |
| 1e6vA03 | 1.20.840.10 | Mainly Alpha › Up-down Bundle › Methyl-coenzyme M Reductase; Chain B, domain 2 › Methyl-coenzyme M reductase, alpha/beta subunit, C-terminal | 0.51 | 41.0 | 3.28e-01 | 88.6% | 89.1% |
| 1x42A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.51 | 38.0 | 4.11e-01 | 88.6% | 100.0% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3860924 | 2498.1.1.41 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M60 | 0.86 | 73.0 | 5.12e-01 | 87.6% | 50.9% |
| 185743 | 2498.1.1.41 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M60 | 0.81 | 71.0 | 4.98e-01 | 93.3% | 32.7% |
| 1945553 | 2498.1.1.41 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M60 | 0.81 | 70.0 | 4.93e-01 | 96.2% | 32.3% |
| 1952651 | 2498.1.1.41 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M60 | 0.79 | 69.0 | 4.59e-01 | 93.3% | 35.3% |
| 2704655 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.76 | 69.0 | 4.64e-01 | 98.1% | 34.0% |
| 4332917 | 2498.1.1.41 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M60 | 0.74 | 66.0 | 4.67e-01 | 96.2% | 36.0% |
| 4944102 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.61 | 42.0 | 4.47e-01 | 71.4% | 84.4% |
| 4947863 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.60 | 41.0 | 4.41e-01 | 71.4% | 84.4% |
| 4933935 | 2008.1.1.159 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Csa1 | 0.52 | 42.0 | 3.17e-01 | 90.5% | 80.3% |
| 3688288 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 37.0 | 3.27e-01 | 76.2% | 69.7% |